Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC114755.2-201ENST00000413520 361 ntBASIC8.78□□□□□ -1
TOP2AP11388 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC8.78□□□□□ -1
TOP2AP11388 AL161722.1-201ENST00000446972 1032 ntBASIC8.78□□□□□ -1
TOP2AP11388 NIP7P2-201ENST00000485801 544 ntBASIC8.78□□□□□ -1
TOP2AP11388 AP003080.1-202ENST00000526526 915 ntBASIC8.78□□□□□ -1
TOP2AP11388 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC8.78□□□□□ -1
TOP2AP11388 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC8.78□□□□□ -1
TOP2AP11388 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
TOP2AP11388 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
TOP2AP11388 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
TOP2AP11388 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
TOP2AP11388 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC8.77□□□□□ -1
TOP2AP11388 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC8.77□□□□□ -1
TOP2AP11388 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
TOP2AP11388 ECM1P2-201ENST00000503354 1577 ntBASIC8.77□□□□□ -1.01
TOP2AP11388 AC138907.8-201ENST00000623981 2256 ntBASIC8.77□□□□□ -1.01
TOP2AP11388 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
TOP2AP11388 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
TOP2AP11388 AC009238.2-201ENST00000431026 355 ntBASIC8.77□□□□□ -1.01
TOP2AP11388 CEACAMP6-201ENST00000452007 574 ntBASIC8.77□□□□□ -1.01
TOP2AP11388 AC068587.1-201ENST00000483613 781 ntBASIC8.77□□□□□ -1.01
TOP2AP11388 AP002981.1-201ENST00000517692 975 ntBASIC8.77□□□□□ -1.01
TOP2AP11388 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC8.77□□□□□ -1.01
TOP2AP11388 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC8.77□□□□□ -1.01
TOP2AP11388 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC8.77□□□□□ -1.01
TOP2AP11388 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
TOP2AP11388 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
TOP2AP11388 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC8.77□□□□□ -1.01
TOP2AP11388 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
TOP2AP11388 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
TOP2AP11388 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
TOP2AP11388 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
TOP2AP11388 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
TOP2AP11388 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC8.77□□□□□ -1.01
TOP2AP11388 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC8.76□□□□□ -1.01
TOP2AP11388 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC8.76□□□□□ -1.01
TOP2AP11388 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
TOP2AP11388 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
TOP2AP11388 AL390316.1-201ENST00000406279 553 ntBASIC8.76□□□□□ -1.01
TOP2AP11388 U3.32-201ENST00000408116 212 ntBASIC8.76□□□□□ -1.01
TOP2AP11388 RNU4-25P-201ENST00000410569 230 ntBASIC8.76□□□□□ -1.01
TOP2AP11388 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC8.76□□□□□ -1.01
TOP2AP11388 OR51B3P-201ENST00000412287 913 ntBASIC8.76□□□□□ -1.01
TOP2AP11388 OR5M12P-201ENST00000423388 929 ntBASIC8.76□□□□□ -1.01
TOP2AP11388 RPL23AP1-201ENST00000428990 471 ntBASIC8.76□□□□□ -1.01
TOP2AP11388 BX276092.6-201ENST00000430476 250 ntBASIC8.76□□□□□ -1.01
TOP2AP11388 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC8.76□□□□□ -1.01
TOP2AP11388 AL691482.1-201ENST00000453255 87 ntBASIC8.76□□□□□ -1.01
TOP2AP11388 BX276092.8-201ENST00000455722 250 ntBASIC8.76□□□□□ -1.01
TOP2AP11388 RNU2-30P-201ENST00000516209 141 ntBASIC8.76□□□□□ -1.01
TOP2AP11388 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC8.76□□□□□ -1.01
TOP2AP11388 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC8.76□□□□□ -1.01
TOP2AP11388 RNF123-214ENST00000629802 207 ntTSL 5 BASIC8.76□□□□□ -1.01
TOP2AP11388 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
TOP2AP11388 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
TOP2AP11388 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC8.76□□□□□ -1.01
TOP2AP11388 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
TOP2AP11388 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC8.76□□□□□ -1.01
TOP2AP11388 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC8.76□□□□□ -1.01
TOP2AP11388 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC8.76□□□□□ -1.01
TOP2AP11388 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
TOP2AP11388 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC8.76□□□□□ -1.01
TOP2AP11388 AC125257.1-201ENST00000560400 2930 ntBASIC8.76□□□□□ -1.01
TOP2AP11388 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
TOP2AP11388 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC8.76□□□□□ -1.01
TOP2AP11388 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC8.76□□□□□ -1.01
TOP2AP11388 MAST4-207ENST00000407621 559 ntTSL 2 BASIC8.75□□□□□ -1.01
TOP2AP11388 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
TOP2AP11388 EIF2S2P2-201ENST00000447161 982 ntBASIC8.75□□□□□ -1.01
TOP2AP11388 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC8.75□□□□□ -1.01
TOP2AP11388 MIR4715-201ENST00000584117 79 ntBASIC8.75□□□□□ -1.01
TOP2AP11388 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC8.75□□□□□ -1.01
TOP2AP11388 MIR6853-201ENST00000619642 74 ntBASIC8.75□□□□□ -1.01
TOP2AP11388 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC8.75□□□□□ -1.01
TOP2AP11388 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC8.75□□□□□ -1.01
TOP2AP11388 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
TOP2AP11388 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC8.75□□□□□ -1.01
TOP2AP11388 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
TOP2AP11388 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC8.75□□□□□ -1.01
TOP2AP11388 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
TOP2AP11388 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
TOP2AP11388 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
TOP2AP11388 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC8.75□□□□□ -1.01
TOP2AP11388 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
TOP2AP11388 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
TOP2AP11388 FHIT-201ENST00000341848 174 ntTSL 3 BASIC8.75□□□□□ -1.01
TOP2AP11388 RN7SKP106-201ENST00000410832 272 ntBASIC8.75□□□□□ -1.01
TOP2AP11388 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC8.75□□□□□ -1.01
TOP2AP11388 AC007064.3-201ENST00000422608 359 ntBASIC8.75□□□□□ -1.01
TOP2AP11388 AL645608.4-201ENST00000423619 154 ntBASIC8.75□□□□□ -1.01
TOP2AP11388 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC8.75□□□□□ -1.01
TOP2AP11388 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC8.75□□□□□ -1.01
TOP2AP11388 SCARNA9-201ENST00000530422 353 ntBASIC8.75□□□□□ -1.01
TOP2AP11388 AC108359.1-201ENST00000616451 1211 ntBASIC8.75□□□□□ -1.01
TOP2AP11388 NCLP2-201ENST00000416078 1462 ntBASIC8.74□□□□□ -1.01
TOP2AP11388 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC8.74□□□□□ -1.01
TOP2AP11388 AL031123.3-201ENST00000623345 1837 ntBASIC8.74□□□□□ -1.01
TOP2AP11388 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
TOP2AP11388 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
TOP2AP11388 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms