Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC6P09630 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC6.05□□□□□ -1.44
HOXC6P09630 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.05□□□□□ -1.44
HOXC6P09630 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC6P09630 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC6P09630 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
HOXC6P09630 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
HOXC6P09630 AC144833.1-201ENST00000567953 4089 ntBASIC6.04□□□□□ -1.44
HOXC6P09630 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
HOXC6P09630 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC6P09630 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC6P09630 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC6P09630 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
HOXC6P09630 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC6P09630 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC6P09630 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC6P09630 U3.3-201ENST00000362986 216 ntBASIC6.04□□□□□ -1.44
HOXC6P09630 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC6P09630 MIR141-201ENST00000384975 95 ntBASIC6.04□□□□□ -1.44
HOXC6P09630 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
HOXC6P09630 DDX39BP1-205ENST00000422507 192 ntBASIC6.04□□□□□ -1.44
HOXC6P09630 RPL7P56-201ENST00000429441 717 ntBASIC6.04□□□□□ -1.44
HOXC6P09630 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC6.04□□□□□ -1.44
HOXC6P09630 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC6.04□□□□□ -1.44
HOXC6P09630 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.04□□□□□ -1.44
HOXC6P09630 snoU13.29-201ENST00000459370 104 ntBASIC6.04□□□□□ -1.44
HOXC6P09630 RPL7P16-201ENST00000479738 738 ntBASIC6.04□□□□□ -1.44
HOXC6P09630 RN7SL423P-201ENST00000486202 304 ntBASIC6.04□□□□□ -1.44
HOXC6P09630 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.04□□□□□ -1.44
HOXC6P09630 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
HOXC6P09630 RNU6-467P-201ENST00000517027 110 ntBASIC6.04□□□□□ -1.44
HOXC6P09630 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.04□□□□□ -1.44
HOXC6P09630 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.04□□□□□ -1.44
HOXC6P09630 AC008033.2-201ENST00000542626 177 ntBASIC6.04□□□□□ -1.44
HOXC6P09630 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.04□□□□□ -1.44
HOXC6P09630 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.04□□□□□ -1.44
HOXC6P09630 EDDM3DP-201ENST00000554692 434 ntBASIC6.04□□□□□ -1.44
HOXC6P09630 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC6.04□□□□□ -1.44
HOXC6P09630 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.04□□□□□ -1.44
HOXC6P09630 AC011487.3-201ENST00000593607 453 ntBASIC6.04□□□□□ -1.44
HOXC6P09630 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.04□□□□□ -1.44
HOXC6P09630 AL355816.2-201ENST00000610049 647 ntBASIC6.04□□□□□ -1.44
HOXC6P09630 EIF3FP1-201ENST00000613970 806 ntBASIC6.04□□□□□ -1.44
HOXC6P09630 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC6P09630 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC6P09630 AC140479.2-201ENST00000421567 3130 ntBASIC6.04□□□□□ -1.44
HOXC6P09630 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.04□□□□□ -1.44
HOXC6P09630 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.04□□□□□ -1.44
HOXC6P09630 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.04□□□□□ -1.44
HOXC6P09630 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.04□□□□□ -1.44
HOXC6P09630 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
HOXC6P09630 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC6P09630 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC6P09630 MIPEPP2-201ENST00000422560 1819 ntBASIC6.04□□□□□ -1.44
HOXC6P09630 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
HOXC6P09630 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC6P09630 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC6P09630 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC6P09630 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC6P09630 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC6P09630 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC6P09630 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC6P09630 UGT2B24P-201ENST00000514441 1597 ntBASIC6.03□□□□□ -1.44
HOXC6P09630 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC6P09630 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.03□□□□□ -1.44
HOXC6P09630 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC6.03□□□□□ -1.44
HOXC6P09630 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC6.03□□□□□ -1.44
HOXC6P09630 ZNF92P1Y-201ENST00000415010 1191 ntBASIC6.03□□□□□ -1.44
HOXC6P09630 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.03□□□□□ -1.44
HOXC6P09630 RPS4XP16-201ENST00000427198 791 ntBASIC6.03□□□□□ -1.44
HOXC6P09630 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC6.03□□□□□ -1.44
HOXC6P09630 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.03□□□□□ -1.44
HOXC6P09630 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC6.03□□□□□ -1.44
HOXC6P09630 AC006463.2-201ENST00000473326 348 ntBASIC6.03□□□□□ -1.44
HOXC6P09630 IGLV2-34-201ENST00000490007 283 ntBASIC6.03□□□□□ -1.44
HOXC6P09630 GAPDHP62-201ENST00000515313 990 ntBASIC6.03□□□□□ -1.44
HOXC6P09630 AL671862.1-201ENST00000515851 349 ntBASIC6.03□□□□□ -1.44
HOXC6P09630 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.03□□□□□ -1.44
HOXC6P09630 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC6P09630 AC084824.2-201ENST00000548906 345 ntBASIC6.03□□□□□ -1.44
HOXC6P09630 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.03□□□□□ -1.44
HOXC6P09630 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.03□□□□□ -1.44
HOXC6P09630 BNIP3P39-201ENST00000601077 554 ntBASIC6.03□□□□□ -1.44
HOXC6P09630 AC009237.13-201ENST00000603193 276 ntBASIC6.03□□□□□ -1.44
HOXC6P09630 BNIP3P35-201ENST00000604530 490 ntBASIC6.03□□□□□ -1.44
HOXC6P09630 BNIP3P7-201ENST00000605641 516 ntBASIC6.03□□□□□ -1.44
HOXC6P09630 AC016590.3-201ENST00000611171 753 ntBASIC6.03□□□□□ -1.44
HOXC6P09630 AL590396.2-201ENST00000636511 1041 ntBASIC6.03□□□□□ -1.44
HOXC6P09630 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.03□□□□□ -1.44
HOXC6P09630 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC6P09630 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC6P09630 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC6P09630 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC6P09630 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.03□□□□□ -1.44
HOXC6P09630 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.03□□□□□ -1.44
HOXC6P09630 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.03□□□□□ -1.44
HOXC6P09630 AC092747.4-201ENST00000620519 1861 ntBASIC6.02□□□□□ -1.44
HOXC6P09630 HSPA8P14-201ENST00000552265 1805 ntBASIC6.02□□□□□ -1.45
HOXC6P09630 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC6P09630 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms