Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RETP07949 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.52□□□□□ -1.53
RETP07949 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.52□□□□□ -1.53
RETP07949 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
RETP07949 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RETP07949 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.52□□□□□ -1.53
RETP07949 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RETP07949 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RETP07949 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RETP07949 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.52□□□□□ -1.53
RETP07949 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.51□□□□□ -1.53
RETP07949 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.51□□□□□ -1.53
RETP07949 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.51□□□□□ -1.53
RETP07949 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
RETP07949 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.51□□□□□ -1.53
RETP07949 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RETP07949 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RETP07949 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
RETP07949 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RETP07949 MFSD8-219ENST00000641228 2559 ntBASIC5.51□□□□□ -1.53
RETP07949 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RETP07949 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.51□□□□□ -1.53
RETP07949 RNU1-136P-201ENST00000384181 164 ntBASIC5.51□□□□□ -1.53
RETP07949 MIR192-201ENST00000384915 110 ntBASIC5.51□□□□□ -1.53
RETP07949 RNA5SP91-201ENST00000390902 119 ntBASIC5.51□□□□□ -1.53
RETP07949 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.51□□□□□ -1.53
RETP07949 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RETP07949 RPS6P23-201ENST00000413224 722 ntBASIC5.51□□□□□ -1.53
RETP07949 VN1R21P-201ENST00000426703 765 ntBASIC5.51□□□□□ -1.53
RETP07949 USP9YP9-201ENST00000429406 715 ntBASIC5.51□□□□□ -1.53
RETP07949 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.51□□□□□ -1.53
RETP07949 AC092324.1-201ENST00000468671 324 ntBASIC5.51□□□□□ -1.53
RETP07949 DEFB109A-201ENST00000482450 265 ntBASIC5.51□□□□□ -1.53
RETP07949 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.51□□□□□ -1.53
RETP07949 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.51□□□□□ -1.53
RETP07949 GAPDHP62-201ENST00000515313 990 ntBASIC5.51□□□□□ -1.53
RETP07949 RN7SKP147-201ENST00000517154 244 ntBASIC5.51□□□□□ -1.53
RETP07949 HMGB1P40-201ENST00000525121 540 ntBASIC5.51□□□□□ -1.53
RETP07949 OR4A43P-201ENST00000532938 908 ntBASIC5.51□□□□□ -1.53
RETP07949 AC063949.1-201ENST00000552900 865 ntBASIC5.51□□□□□ -1.53
RETP07949 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.51□□□□□ -1.53
RETP07949 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.51□□□□□ -1.53
RETP07949 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.51□□□□□ -1.53
RETP07949 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.51□□□□□ -1.53
RETP07949 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.51□□□□□ -1.53
RETP07949 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.51□□□□□ -1.53
RETP07949 HIRAP1-201ENST00000605318 787 ntBASIC5.51□□□□□ -1.53
RETP07949 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.51□□□□□ -1.53
RETP07949 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.51□□□□□ -1.53
RETP07949 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.51□□□□□ -1.53
RETP07949 MIR7641-1-201ENST00000627518 61 ntBASIC5.51□□□□□ -1.53
RETP07949 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RETP07949 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
RETP07949 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RETP07949 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
RETP07949 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RETP07949 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
RETP07949 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.51□□□□□ -1.53
RETP07949 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RETP07949 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.5□□□□□ -1.53
RETP07949 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
RETP07949 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RETP07949 MTND5P12-201ENST00000502851 1449 ntBASIC5.5□□□□□ -1.53
RETP07949 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.5□□□□□ -1.53
RETP07949 MFSD8-239ENST00000641590 2479 ntBASIC5.5□□□□□ -1.53
RETP07949 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RETP07949 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.5□□□□□ -1.53
RETP07949 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RETP07949 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RETP07949 DDX18P6-201ENST00000450119 1997 ntBASIC5.5□□□□□ -1.53
RETP07949 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RETP07949 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RETP07949 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RETP07949 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.5□□□□□ -1.53
RETP07949 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.5□□□□□ -1.53
RETP07949 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.5□□□□□ -1.53
RETP07949 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.5□□□□□ -1.53
RETP07949 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.5□□□□□ -1.53
RETP07949 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.5□□□□□ -1.53
RETP07949 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.5□□□□□ -1.53
RETP07949 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
RETP07949 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.5□□□□□ -1.53
RETP07949 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.5□□□□□ -1.53
RETP07949 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.5□□□□□ -1.53
RETP07949 RAB9BP1-201ENST00000519581 626 ntBASIC5.5□□□□□ -1.53
RETP07949 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.5□□□□□ -1.53
RETP07949 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.5□□□□□ -1.53
RETP07949 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.5□□□□□ -1.53
RETP07949 AC018552.1-201ENST00000562099 811 ntBASIC5.5□□□□□ -1.53
RETP07949 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.5□□□□□ -1.53
RETP07949 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
RETP07949 AC069307.1-201ENST00000602820 447 ntBASIC5.5□□□□□ -1.53
RETP07949 AL353729.2-201ENST00000605859 1249 ntBASIC5.5□□□□□ -1.53
RETP07949 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.5□□□□□ -1.53
RETP07949 AC007786.3-201ENST00000615154 596 ntBASIC5.5□□□□□ -1.53
RETP07949 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.5□□□□□ -1.53
RETP07949 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.5□□□□□ -1.53
RETP07949 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.5□□□□□ -1.53
RETP07949 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
RETP07949 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 178.1 ms