Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.2□□□□□ -1.58
HLA-DQB2P05538 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.2□□□□□ -1.58
HLA-DQB2P05538 AC015660.5-201ENST00000623238 564 ntBASIC5.2□□□□□ -1.58
HLA-DQB2P05538 AC099494.2-201ENST00000623371 978 ntBASIC5.2□□□□□ -1.58
HLA-DQB2P05538 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.2□□□□□ -1.58
HLA-DQB2P05538 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.2□□□□□ -1.58
HLA-DQB2P05538 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DQB2P05538 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.2□□□□□ -1.58
HLA-DQB2P05538 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DQB2P05538 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.2□□□□□ -1.58
HLA-DQB2P05538 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.2□□□□□ -1.58
HLA-DQB2P05538 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DQB2P05538 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.2□□□□□ -1.58
HLA-DQB2P05538 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DQB2P05538 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.19□□□□□ -1.58
HLA-DQB2P05538 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DQB2P05538 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DQB2P05538 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DQB2P05538 CASC19-221ENST00000641309 1382 ntBASIC5.19□□□□□ -1.58
HLA-DQB2P05538 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DQB2P05538 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DQB2P05538 AC004817.4-201ENST00000602396 3625 ntBASIC5.19□□□□□ -1.58
HLA-DQB2P05538 AC112198.2-201ENST00000426589 6996 ntBASIC5.19□□□□□ -1.58
HLA-DQB2P05538 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
HLA-DQB2P05538 RN7SKP114-201ENST00000410327 279 ntBASIC5.19□□□□□ -1.58
HLA-DQB2P05538 RN7SKP273-201ENST00000411392 314 ntBASIC5.19□□□□□ -1.58
HLA-DQB2P05538 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.19□□□□□ -1.58
HLA-DQB2P05538 AC091180.1-201ENST00000462104 372 ntBASIC5.19□□□□□ -1.58
HLA-DQB2P05538 RN7SL443P-201ENST00000464331 290 ntBASIC5.19□□□□□ -1.58
HLA-DQB2P05538 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.19□□□□□ -1.58
HLA-DQB2P05538 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.19□□□□□ -1.58
HLA-DQB2P05538 RNA5SP34-201ENST00000516887 130 ntBASIC5.19□□□□□ -1.58
HLA-DQB2P05538 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.19□□□□□ -1.58
HLA-DQB2P05538 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.19□□□□□ -1.58
HLA-DQB2P05538 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.19□□□□□ -1.58
HLA-DQB2P05538 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.19□□□□□ -1.58
HLA-DQB2P05538 SETP3-201ENST00000581726 813 ntBASIC5.19□□□□□ -1.58
HLA-DQB2P05538 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.19□□□□□ -1.58
HLA-DQB2P05538 AL583832.1-201ENST00000603227 784 ntBASIC5.19□□□□□ -1.58
HLA-DQB2P05538 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.19□□□□□ -1.58
HLA-DQB2P05538 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.19□□□□□ -1.58
HLA-DQB2P05538 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.19□□□□□ -1.58
HLA-DQB2P05538 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
HLA-DQB2P05538 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DQB2P05538 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.19□□□□□ -1.58
HLA-DQB2P05538 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DQB2P05538 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
HLA-DQB2P05538 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
HLA-DQB2P05538 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.19□□□□□ -1.58
HLA-DQB2P05538 CIR1P2-201ENST00000514821 1342 ntBASIC5.19□□□□□ -1.58
HLA-DQB2P05538 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.19□□□□□ -1.58
HLA-DQB2P05538 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.19□□□□□ -1.58
HLA-DQB2P05538 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DQB2P05538 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DQB2P05538 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DQB2P05538 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DQB2P05538 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DQB2P05538 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HLA-DQB2P05538 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
HLA-DQB2P05538 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
HLA-DQB2P05538 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DQB2P05538 RPL23P2-201ENST00000320371 421 ntBASIC5.18□□□□□ -1.58
HLA-DQB2P05538 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HLA-DQB2P05538 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DQB2P05538 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DQB2P05538 U3.36-201ENST00000408418 213 ntBASIC5.18□□□□□ -1.58
HLA-DQB2P05538 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.18□□□□□ -1.58
HLA-DQB2P05538 AC211486.3-201ENST00000412694 621 ntBASIC5.18□□□□□ -1.58
HLA-DQB2P05538 PCNPP4-201ENST00000414817 517 ntBASIC5.18□□□□□ -1.58
HLA-DQB2P05538 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.18□□□□□ -1.58
HLA-DQB2P05538 BX510359.3-201ENST00000422168 306 ntBASIC5.18□□□□□ -1.58
HLA-DQB2P05538 AC005033.1-201ENST00000428904 813 ntBASIC5.18□□□□□ -1.58
HLA-DQB2P05538 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.18□□□□□ -1.58
HLA-DQB2P05538 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HLA-DQB2P05538 AC021660.1-201ENST00000465006 554 ntBASIC5.18□□□□□ -1.58
HLA-DQB2P05538 AC005532.2-201ENST00000467154 373 ntBASIC5.18□□□□□ -1.58
HLA-DQB2P05538 RN7SL727P-201ENST00000482164 296 ntBASIC5.18□□□□□ -1.58
HLA-DQB2P05538 SNRPCP2-201ENST00000504370 475 ntBASIC5.18□□□□□ -1.58
HLA-DQB2P05538 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.18□□□□□ -1.58
HLA-DQB2P05538 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.18□□□□□ -1.58
HLA-DQB2P05538 AC090286.3-201ENST00000573133 187 ntBASIC5.18□□□□□ -1.58
HLA-DQB2P05538 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.18□□□□□ -1.58
HLA-DQB2P05538 TAS2R6P-201ENST00000605022 826 ntBASIC5.18□□□□□ -1.58
HLA-DQB2P05538 AC018690.1-201ENST00000608144 626 ntBASIC5.18□□□□□ -1.58
HLA-DQB2P05538 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.18□□□□□ -1.58
HLA-DQB2P05538 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.18□□□□□ -1.58
HLA-DQB2P05538 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.18□□□□□ -1.58
HLA-DQB2P05538 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DQB2P05538 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DQB2P05538 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.18□□□□□ -1.58
HLA-DQB2P05538 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DQB2P05538 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
HLA-DQB2P05538 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DQB2P05538 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DQB2P05538 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.17□□□□□ -1.58
HLA-DQB2P05538 ZNF733P-202ENST00000444809 1573 ntBASIC5.17□□□□□ -1.58
HLA-DQB2P05538 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
HLA-DQB2P05538 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.17□□□□□ -1.58
HLA-DQB2P05538 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.17□□□□□ -1.58
HLA-DQB2P05538 AC063976.2-201ENST00000425667 3556 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms