Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC6.2□□□□□ -1.42
COL1A1P02452 AC073264.2-201ENST00000448886 166 ntBASIC6.2□□□□□ -1.42
COL1A1P02452 IGHV5-78-201ENST00000450948 295 ntBASIC6.2□□□□□ -1.42
COL1A1P02452 PSAT1P4-201ENST00000466500 526 ntBASIC6.2□□□□□ -1.42
COL1A1P02452 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL1A1P02452 AC010350.1-201ENST00000504908 231 ntBASIC6.2□□□□□ -1.42
COL1A1P02452 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.2□□□□□ -1.42
COL1A1P02452 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC6.2□□□□□ -1.42
COL1A1P02452 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC6.2□□□□□ -1.42
COL1A1P02452 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.2□□□□□ -1.42
COL1A1P02452 MIR5096-201ENST00000583713 70 ntBASIC6.2□□□□□ -1.42
COL1A1P02452 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.2□□□□□ -1.42
COL1A1P02452 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.2□□□□□ -1.42
COL1A1P02452 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC6.2□□□□□ -1.42
COL1A1P02452 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.2□□□□□ -1.42
COL1A1P02452 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL1A1P02452 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.19□□□□□ -1.42
COL1A1P02452 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
COL1A1P02452 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL1A1P02452 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.19□□□□□ -1.42
COL1A1P02452 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.19□□□□□ -1.42
COL1A1P02452 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
COL1A1P02452 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.19□□□□□ -1.42
COL1A1P02452 AC092681.1-201ENST00000297369 291 ntBASIC6.19□□□□□ -1.42
COL1A1P02452 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL1A1P02452 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
COL1A1P02452 RNU6-398P-201ENST00000384143 109 ntBASIC6.19□□□□□ -1.42
COL1A1P02452 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC6.19□□□□□ -1.42
COL1A1P02452 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.19□□□□□ -1.42
COL1A1P02452 AC008745.1-201ENST00000604064 271 ntBASIC6.19□□□□□ -1.42
COL1A1P02452 MIR6780A-201ENST00000615089 68 ntBASIC6.19□□□□□ -1.42
COL1A1P02452 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC6.19□□□□□ -1.42
COL1A1P02452 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC6.19□□□□□ -1.42
COL1A1P02452 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
COL1A1P02452 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL1A1P02452 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
COL1A1P02452 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.19□□□□□ -1.42
COL1A1P02452 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL1A1P02452 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.18□□□□□ -1.42
COL1A1P02452 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
COL1A1P02452 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL1A1P02452 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL1A1P02452 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC6.18□□□□□ -1.42
COL1A1P02452 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL1A1P02452 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL1A1P02452 RNA5SP453-201ENST00000362503 119 ntBASIC6.18□□□□□ -1.42
COL1A1P02452 RNU1-32P-201ENST00000363937 159 ntBASIC6.18□□□□□ -1.42
COL1A1P02452 HSPD1P12-201ENST00000429127 1069 ntBASIC6.18□□□□□ -1.42
COL1A1P02452 RPL19P16-201ENST00000433839 588 ntBASIC6.18□□□□□ -1.42
COL1A1P02452 AC091390.1-201ENST00000433904 331 ntBASIC6.18□□□□□ -1.42
COL1A1P02452 NPM1P18-201ENST00000434232 732 ntBASIC6.18□□□□□ -1.42
COL1A1P02452 RPL7AP61-201ENST00000443410 636 ntBASIC6.18□□□□□ -1.42
COL1A1P02452 RN7SL189P-201ENST00000468631 289 ntBASIC6.18□□□□□ -1.42
COL1A1P02452 RN7SL459P-201ENST00000481078 302 ntBASIC6.18□□□□□ -1.42
COL1A1P02452 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC6.18□□□□□ -1.42
COL1A1P02452 OR7H2P-201ENST00000513483 306 ntBASIC6.18□□□□□ -1.42
COL1A1P02452 C1GALT1P3-201ENST00000522049 819 ntBASIC6.18□□□□□ -1.42
COL1A1P02452 SCARNA9-201ENST00000530422 353 ntBASIC6.18□□□□□ -1.42
COL1A1P02452 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL1A1P02452 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC6.18□□□□□ -1.42
COL1A1P02452 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.18□□□□□ -1.42
COL1A1P02452 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC6.18□□□□□ -1.42
COL1A1P02452 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL1A1P02452 AC068790.7-201ENST00000602347 528 ntBASIC6.18□□□□□ -1.42
COL1A1P02452 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC6.18□□□□□ -1.42
COL1A1P02452 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
COL1A1P02452 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.18□□□□□ -1.42
COL1A1P02452 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL1A1P02452 AL137141.1-201ENST00000624622 4836 ntBASIC6.18□□□□□ -1.42
COL1A1P02452 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL1A1P02452 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
COL1A1P02452 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL1A1P02452 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.18□□□□□ -1.42
COL1A1P02452 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL1A1P02452 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL1A1P02452 AL137058.3-201ENST00000624531 3099 ntBASIC6.18□□□□□ -1.42
COL1A1P02452 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.17□□□□□ -1.42
COL1A1P02452 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
COL1A1P02452 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
COL1A1P02452 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL1A1P02452 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC6.17□□□□□ -1.42
COL1A1P02452 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC6.17□□□□□ -1.42
COL1A1P02452 AC119751.6-201ENST00000416712 186 ntBASIC6.17□□□□□ -1.42
COL1A1P02452 RPL7AP49-201ENST00000429522 581 ntBASIC6.17□□□□□ -1.42
COL1A1P02452 AL591438.1-201ENST00000433508 581 ntBASIC6.17□□□□□ -1.42
COL1A1P02452 AL354714.3-201ENST00000447284 493 ntBASIC6.17□□□□□ -1.42
COL1A1P02452 TCEA1P1-201ENST00000449716 880 ntBASIC6.17□□□□□ -1.42
COL1A1P02452 AC005412.2-201ENST00000492004 341 ntBASIC6.17□□□□□ -1.42
COL1A1P02452 RPSAP51-201ENST00000497462 645 ntBASIC6.17□□□□□ -1.42
COL1A1P02452 RNA5SP392-201ENST00000516905 112 ntBASIC6.17□□□□□ -1.42
COL1A1P02452 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.17□□□□□ -1.42
COL1A1P02452 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL1A1P02452 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC6.17□□□□□ -1.42
COL1A1P02452 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC6.17□□□□□ -1.42
COL1A1P02452 MIR3667-201ENST00000581025 74 ntBASIC6.17□□□□□ -1.42
COL1A1P02452 MIR7853-201ENST00000584820 132 ntBASIC6.17□□□□□ -1.42
COL1A1P02452 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC6.17□□□□□ -1.42
COL1A1P02452 AL162574.1-201ENST00000615702 950 ntBASIC6.17□□□□□ -1.42
COL1A1P02452 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.17□□□□□ -1.42
COL1A1P02452 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 156.2 ms