Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.07□□□□□ -1.6
HCN1O60741 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HCN1O60741 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.07□□□□□ -1.6
HCN1O60741 AC012616.1-201ENST00000600294 197 ntBASIC5.07□□□□□ -1.6
HCN1O60741 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.07□□□□□ -1.6
HCN1O60741 AL356608.1-201ENST00000610034 820 ntBASIC5.07□□□□□ -1.6
HCN1O60741 AC026367.3-201ENST00000619032 590 ntBASIC5.07□□□□□ -1.6
HCN1O60741 AC087821.1-201ENST00000623639 567 ntBASIC5.07□□□□□ -1.6
HCN1O60741 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.07□□□□□ -1.6
HCN1O60741 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HCN1O60741 SAMMSON-227ENST00000642114 1199 ntBASIC5.07□□□□□ -1.6
HCN1O60741 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.07□□□□□ -1.6
HCN1O60741 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.07□□□□□ -1.6
HCN1O60741 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
HCN1O60741 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HCN1O60741 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
HCN1O60741 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
HCN1O60741 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
HCN1O60741 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HCN1O60741 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HCN1O60741 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
HCN1O60741 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.06□□□□□ -1.6
HCN1O60741 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.06□□□□□ -1.6
HCN1O60741 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.06□□□□□ -1.6
HCN1O60741 AC006206.1-201ENST00000544842 3387 ntBASIC5.06□□□□□ -1.6
HCN1O60741 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HCN1O60741 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.06□□□□□ -1.6
HCN1O60741 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HCN1O60741 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.06□□□□□ -1.6
HCN1O60741 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HCN1O60741 RN7SKP6-201ENST00000364795 319 ntBASIC5.06□□□□□ -1.6
HCN1O60741 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HCN1O60741 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HCN1O60741 AL009179.1-201ENST00000406085 265 ntBASIC5.06□□□□□ -1.6
HCN1O60741 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HCN1O60741 BX510359.3-201ENST00000422168 306 ntBASIC5.06□□□□□ -1.6
HCN1O60741 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.06□□□□□ -1.6
HCN1O60741 CFL1P1-202ENST00000432948 411 ntBASIC5.06□□□□□ -1.6
HCN1O60741 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.06□□□□□ -1.6
HCN1O60741 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.06□□□□□ -1.6
HCN1O60741 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.06□□□□□ -1.6
HCN1O60741 RPL5P16-201ENST00000471467 790 ntBASIC5.06□□□□□ -1.6
HCN1O60741 AC098583.1-201ENST00000480875 255 ntBASIC5.06□□□□□ -1.6
HCN1O60741 AL049874.2-201ENST00000492636 288 ntBASIC5.06□□□□□ -1.6
HCN1O60741 AC090638.1-201ENST00000498296 909 ntBASIC5.06□□□□□ -1.6
HCN1O60741 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.06□□□□□ -1.6
HCN1O60741 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.06□□□□□ -1.6
HCN1O60741 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.06□□□□□ -1.6
HCN1O60741 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.06□□□□□ -1.6
HCN1O60741 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.06□□□□□ -1.6
HCN1O60741 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.06□□□□□ -1.6
HCN1O60741 NPM1P45-201ENST00000583151 559 ntBASIC5.06□□□□□ -1.6
HCN1O60741 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.06□□□□□ -1.6
HCN1O60741 IMMP1LP3-201ENST00000604197 224 ntBASIC5.06□□□□□ -1.6
HCN1O60741 SUGT1P3-202ENST00000604259 383 ntBASIC5.06□□□□□ -1.6
HCN1O60741 AC087468.1-201ENST00000604365 630 ntBASIC5.06□□□□□ -1.6
HCN1O60741 uc_338.7-201ENST00000621834 124 ntBASIC5.06□□□□□ -1.6
HCN1O60741 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.06□□□□□ -1.6
HCN1O60741 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.06□□□□□ -1.6
HCN1O60741 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
HCN1O60741 CASC19-264ENST00000641912 1184 ntBASIC5.06□□□□□ -1.6
HCN1O60741 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.06□□□□□ -1.6
HCN1O60741 MT-RNR2-201ENST00000387347 1559 ntBASIC5.06□□□□□ -1.6
HCN1O60741 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
HCN1O60741 AC144833.1-201ENST00000567953 4089 ntBASIC5.06□□□□□ -1.6
HCN1O60741 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.06□□□□□ -1.6
HCN1O60741 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
HCN1O60741 AC104623.2-202ENST00000623477 4002 ntBASIC5.06□□□□□ -1.6
HCN1O60741 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HCN1O60741 AL359715.3-201ENST00000569267 2123 ntBASIC5.06□□□□□ -1.6
HCN1O60741 TCP1P3-201ENST00000414406 1498 ntBASIC5.06□□□□□ -1.6
HCN1O60741 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
HCN1O60741 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.05□□□□□ -1.6
HCN1O60741 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.05□□□□□ -1.6
HCN1O60741 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.05□□□□□ -1.6
HCN1O60741 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HCN1O60741 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HCN1O60741 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
HCN1O60741 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HCN1O60741 AC073136.1-201ENST00000449426 2884 ntBASIC5.05□□□□□ -1.6
HCN1O60741 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HCN1O60741 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HCN1O60741 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HCN1O60741 SNORD56.6-201ENST00000384569 71 ntBASIC5.05□□□□□ -1.6
HCN1O60741 GAPDHP15-201ENST00000398586 975 ntBASIC5.05□□□□□ -1.6
HCN1O60741 MIR1286-201ENST00000408112 78 ntBASIC5.05□□□□□ -1.6
HCN1O60741 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.05□□□□□ -1.6
HCN1O60741 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.05□□□□□ -1.6
HCN1O60741 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.05□□□□□ -1.6
HCN1O60741 AL355433.1-201ENST00000422804 300 ntBASIC5.05□□□□□ -1.6
HCN1O60741 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.05□□□□□ -1.6
HCN1O60741 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.05□□□□□ -1.6
HCN1O60741 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.05□□□□□ -1.6
HCN1O60741 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.05□□□□□ -1.6
HCN1O60741 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.05□□□□□ -1.6
HCN1O60741 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.05□□□□□ -1.6
HCN1O60741 AC019185.1-201ENST00000442718 389 ntBASIC5.05□□□□□ -1.6
HCN1O60741 AC012512.1-201ENST00000446594 718 ntBASIC5.05□□□□□ -1.6
HCN1O60741 AZGP1P2-201ENST00000454506 345 ntBASIC5.05□□□□□ -1.6
HCN1O60741 RANP1-206ENST00000455094 651 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms