Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 RPL5P13-201ENST00000462840 709 ntBASIC5.13□□□□□ -1.59
SSX4O60224 AL122020.1-201ENST00000472287 459 ntBASIC5.13□□□□□ -1.59
SSX4O60224 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.13□□□□□ -1.59
SSX4O60224 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.13□□□□□ -1.59
SSX4O60224 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
SSX4O60224 CCDC11P1-201ENST00000503137 1162 ntBASIC5.13□□□□□ -1.59
SSX4O60224 AC027338.1-201ENST00000514840 825 ntBASIC5.13□□□□□ -1.59
SSX4O60224 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
SSX4O60224 OR56A7P-201ENST00000524865 941 ntBASIC5.13□□□□□ -1.59
SSX4O60224 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.13□□□□□ -1.59
SSX4O60224 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SSX4O60224 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.13□□□□□ -1.59
SSX4O60224 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.13□□□□□ -1.59
SSX4O60224 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.13□□□□□ -1.59
SSX4O60224 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.13□□□□□ -1.59
SSX4O60224 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.13□□□□□ -1.59
SSX4O60224 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.13□□□□□ -1.59
SSX4O60224 AL513327.3-201ENST00000602618 469 ntBASIC5.13□□□□□ -1.59
SSX4O60224 AC098483.2-201ENST00000603158 454 ntBASIC5.13□□□□□ -1.59
SSX4O60224 FAM27E4-201ENST00000605259 342 ntBASIC5.13□□□□□ -1.59
SSX4O60224 AC135178.6-201ENST00000605314 398 ntBASIC5.13□□□□□ -1.59
SSX4O60224 AC004775.1-201ENST00000607389 753 ntBASIC5.13□□□□□ -1.59
SSX4O60224 AL451049.1-201ENST00000608672 497 ntBASIC5.13□□□□□ -1.59
SSX4O60224 AC019131.2-201ENST00000609071 870 ntBASIC5.13□□□□□ -1.59
SSX4O60224 MIR6809-201ENST00000612189 116 ntBASIC5.13□□□□□ -1.59
SSX4O60224 MIR6826-201ENST00000617808 98 ntBASIC5.13□□□□□ -1.59
SSX4O60224 AP005431.1-201ENST00000618479 319 ntBASIC5.13□□□□□ -1.59
SSX4O60224 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.13□□□□□ -1.59
SSX4O60224 AL445493.3-201ENST00000619568 477 ntBASIC5.13□□□□□ -1.59
SSX4O60224 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.13□□□□□ -1.59
SSX4O60224 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SSX4O60224 OR8G3P-202ENST00000641572 1255 ntBASIC5.13□□□□□ -1.59
SSX4O60224 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SSX4O60224 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SSX4O60224 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
SSX4O60224 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
SSX4O60224 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.13□□□□□ -1.59
SSX4O60224 RBPJP7-201ENST00000442803 1447 ntBASIC5.13□□□□□ -1.59
SSX4O60224 RBPJP5-201ENST00000449433 1447 ntBASIC5.13□□□□□ -1.59
SSX4O60224 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SSX4O60224 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
SSX4O60224 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SSX4O60224 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSX4O60224 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SSX4O60224 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SSX4O60224 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
SSX4O60224 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.12□□□□□ -1.59
SSX4O60224 AC132825.1-201ENST00000463573 2247 ntBASIC5.12□□□□□ -1.59
SSX4O60224 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SSX4O60224 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.12□□□□□ -1.59
SSX4O60224 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.12□□□□□ -1.59
SSX4O60224 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSX4O60224 AL137141.1-201ENST00000624622 4836 ntBASIC5.12□□□□□ -1.59
SSX4O60224 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SSX4O60224 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSX4O60224 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.12□□□□□ -1.59
SSX4O60224 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSX4O60224 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
SSX4O60224 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SSX4O60224 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSX4O60224 U3.7-201ENST00000363668 216 ntBASIC5.12□□□□□ -1.59
SSX4O60224 RN7SKP292-201ENST00000365522 317 ntBASIC5.12□□□□□ -1.59
SSX4O60224 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSX4O60224 AL133482.1-201ENST00000415988 498 ntBASIC5.12□□□□□ -1.59
SSX4O60224 MORF4L1P7-201ENST00000426038 703 ntBASIC5.12□□□□□ -1.59
SSX4O60224 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.12□□□□□ -1.59
SSX4O60224 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.12□□□□□ -1.59
SSX4O60224 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.12□□□□□ -1.59
SSX4O60224 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.12□□□□□ -1.59
SSX4O60224 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.12□□□□□ -1.59
SSX4O60224 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SSX4O60224 AC016027.4-201ENST00000450866 277 ntBASIC5.12□□□□□ -1.59
SSX4O60224 AC069277.2-201ENST00000454211 432 ntBASIC5.12□□□□□ -1.59
SSX4O60224 MTND2P6-201ENST00000455337 1030 ntBASIC5.12□□□□□ -1.59
SSX4O60224 AC023141.9-201ENST00000458734 412 ntBASIC5.12□□□□□ -1.59
SSX4O60224 AC079080.1-201ENST00000479841 822 ntBASIC5.12□□□□□ -1.59
SSX4O60224 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.12□□□□□ -1.59
SSX4O60224 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SSX4O60224 AC083795.1-201ENST00000491760 320 ntBASIC5.12□□□□□ -1.59
SSX4O60224 RPS4XP14-201ENST00000493072 781 ntBASIC5.12□□□□□ -1.59
SSX4O60224 AC010468.3-201ENST00000508225 458 ntBASIC5.12□□□□□ -1.59
SSX4O60224 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.12□□□□□ -1.59
SSX4O60224 AC103833.1-201ENST00000517442 172 ntBASIC5.12□□□□□ -1.59
SSX4O60224 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.12□□□□□ -1.59
SSX4O60224 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.12□□□□□ -1.59
SSX4O60224 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.12□□□□□ -1.59
SSX4O60224 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SSX4O60224 PCNAP4-201ENST00000532690 730 ntBASIC5.12□□□□□ -1.59
SSX4O60224 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC5.12□□□□□ -1.59
SSX4O60224 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.12□□□□□ -1.59
SSX4O60224 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.12□□□□□ -1.59
SSX4O60224 SNORD95-201ENST00000579879 68 ntBASIC5.12□□□□□ -1.59
SSX4O60224 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.12□□□□□ -1.59
SSX4O60224 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SSX4O60224 AC010632.3-201ENST00000611377 369 ntBASIC5.12□□□□□ -1.59
SSX4O60224 AC004241.3-201ENST00000611728 517 ntBASIC5.12□□□□□ -1.59
SSX4O60224 AL138960.2-201ENST00000625145 535 ntBASIC5.12□□□□□ -1.59
SSX4O60224 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.12□□□□□ -1.59
SSX4O60224 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.12□□□□□ -1.59
SSX4O60224 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms