Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 AC104339.1-201ENST00000465478 348 ntBASIC5.41□□□□□ -1.54
HOXA3O43365 AC115223.1-201ENST00000466377 870 ntBASIC5.41□□□□□ -1.54
HOXA3O43365 RPS14P8-201ENST00000478778 369 ntBASIC5.41□□□□□ -1.54
HOXA3O43365 GAPDHP39-201ENST00000481866 979 ntBASIC5.41□□□□□ -1.54
HOXA3O43365 RPS4XP23-201ENST00000487801 237 ntBASIC5.41□□□□□ -1.54
HOXA3O43365 RPL37P23-201ENST00000492641 294 ntBASIC5.41□□□□□ -1.54
HOXA3O43365 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HOXA3O43365 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.41□□□□□ -1.54
HOXA3O43365 AC122718.2-201ENST00000505325 591 ntBASIC5.41□□□□□ -1.54
HOXA3O43365 AC004069.2-201ENST00000505438 1114 ntBASIC5.41□□□□□ -1.54
HOXA3O43365 CBX3P3-201ENST00000508108 532 ntBASIC5.41□□□□□ -1.54
HOXA3O43365 RN7SKP70-201ENST00000516655 271 ntBASIC5.41□□□□□ -1.54
HOXA3O43365 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.41□□□□□ -1.54
HOXA3O43365 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.41□□□□□ -1.54
HOXA3O43365 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
HOXA3O43365 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.41□□□□□ -1.54
HOXA3O43365 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.41□□□□□ -1.54
HOXA3O43365 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.41□□□□□ -1.54
HOXA3O43365 OR4A21P-201ENST00000532759 944 ntBASIC5.41□□□□□ -1.54
HOXA3O43365 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.41□□□□□ -1.54
HOXA3O43365 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXA3O43365 RN7SL230P-201ENST00000580835 303 ntBASIC5.41□□□□□ -1.54
HOXA3O43365 AC107982.3-201ENST00000584957 985 ntBASIC5.41□□□□□ -1.54
HOXA3O43365 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.41□□□□□ -1.54
HOXA3O43365 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HOXA3O43365 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.41□□□□□ -1.54
HOXA3O43365 AC091133.5-201ENST00000603088 301 ntBASIC5.41□□□□□ -1.54
HOXA3O43365 AC139493.1-201ENST00000604368 397 ntBASIC5.41□□□□□ -1.54
HOXA3O43365 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXA3O43365 AC068944.2-201ENST00000610373 403 ntBASIC5.41□□□□□ -1.54
HOXA3O43365 DLEU2_1.1-201ENST00000612089 120 ntBASIC5.41□□□□□ -1.54
HOXA3O43365 DLEU2_1.2-201ENST00000614667 120 ntBASIC5.41□□□□□ -1.54
HOXA3O43365 AC009509.4-201ENST00000619202 509 ntBASIC5.41□□□□□ -1.54
HOXA3O43365 RACK1-235ENST00000626067 564 ntTSL 2 BASIC5.41□□□□□ -1.54
HOXA3O43365 PCMTD1P7-201ENST00000634506 357 ntBASIC5.41□□□□□ -1.54
HOXA3O43365 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.41□□□□□ -1.54
HOXA3O43365 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
HOXA3O43365 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.41□□□□□ -1.54
HOXA3O43365 AL354702.2-202ENST00000641481 890 ntBASIC5.41□□□□□ -1.54
HOXA3O43365 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXA3O43365 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXA3O43365 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.41□□□□□ -1.54
HOXA3O43365 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXA3O43365 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HOXA3O43365 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXA3O43365 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXA3O43365 MT-RNR2-201ENST00000387347 1559 ntBASIC5.41□□□□□ -1.54
HOXA3O43365 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXA3O43365 AC132219.2-201ENST00000624416 2327 ntBASIC5.41□□□□□ -1.54
HOXA3O43365 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXA3O43365 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXA3O43365 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXA3O43365 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXA3O43365 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.41□□□□□ -1.54
HOXA3O43365 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXA3O43365 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXA3O43365 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HOXA3O43365 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
HOXA3O43365 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
HOXA3O43365 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HOXA3O43365 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HOXA3O43365 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HOXA3O43365 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC5.4□□□□□ -1.54
HOXA3O43365 AL359091.1-201ENST00000449048 1734 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC5.4□□□□□ -1.54
HOXA3O43365 AC100871.1-201ENST00000507871 1456 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HOXA3O43365 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.4□□□□□ -1.54
HOXA3O43365 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC5.4□□□□□ -1.54
HOXA3O43365 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HOXA3O43365 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC5.4□□□□□ -1.54
HOXA3O43365 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HOXA3O43365 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
HOXA3O43365 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
HOXA3O43365 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
HOXA3O43365 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HOXA3O43365 RNU1-65P-201ENST00000363919 148 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HOXA3O43365 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HOXA3O43365 RNU6-253P-201ENST00000384730 105 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 DEFB108C-201ENST00000400154 252 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
HOXA3O43365 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC5.4□□□□□ -1.54
HOXA3O43365 RN7SKP86-201ENST00000410454 332 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 RNA5SP498-201ENST00000411342 120 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 PGBD4P8-201ENST00000412993 562 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 RANP6-201ENST00000413691 644 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 AL773545.3-201ENST00000414297 706 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.4□□□□□ -1.54
HOXA3O43365 AC019050.1-201ENST00000418508 492 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC5.4□□□□□ -1.54
HOXA3O43365 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HOXA3O43365 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
HOXA3O43365 DPRXP1-201ENST00000426312 460 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 RPL23AP4-201ENST00000427757 463 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 AP001324.1-201ENST00000428553 399 ntBASIC5.4□□□□□ -1.54
HOXA3O43365 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.4□□□□□ -1.54
HOXA3O43365 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.4□□□□□ -1.54
HOXA3O43365 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms