Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 RNA5SP326-201ENST00000363209 110 ntBASIC6.11□□□□□ -1.43
FOXN3O00409 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
FOXN3O00409 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
FOXN3O00409 AC073310.1-201ENST00000423226 1033 ntBASIC6.11□□□□□ -1.43
FOXN3O00409 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC6.11□□□□□ -1.43
FOXN3O00409 HSPE1P16-201ENST00000426640 348 ntBASIC6.11□□□□□ -1.43
FOXN3O00409 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6.11□□□□□ -1.43
FOXN3O00409 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.11□□□□□ -1.43
FOXN3O00409 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.11□□□□□ -1.43
FOXN3O00409 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC6.11□□□□□ -1.43
FOXN3O00409 HMGB1P5-202ENST00000451497 985 ntBASIC6.11□□□□□ -1.43
FOXN3O00409 AC021205.1-201ENST00000468797 348 ntBASIC6.11□□□□□ -1.43
FOXN3O00409 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC6.11□□□□□ -1.43
FOXN3O00409 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.11□□□□□ -1.43
FOXN3O00409 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.11□□□□□ -1.43
FOXN3O00409 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.11□□□□□ -1.43
FOXN3O00409 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
FOXN3O00409 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.11□□□□□ -1.43
FOXN3O00409 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.11□□□□□ -1.43
FOXN3O00409 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.11□□□□□ -1.43
FOXN3O00409 AC134669.1-201ENST00000581275 672 ntBASIC6.11□□□□□ -1.43
FOXN3O00409 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.11□□□□□ -1.43
FOXN3O00409 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.11□□□□□ -1.43
FOXN3O00409 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.11□□□□□ -1.43
FOXN3O00409 AC063977.5-201ENST00000601044 974 ntBASIC6.11□□□□□ -1.43
FOXN3O00409 AC096947.1-201ENST00000603233 470 ntBASIC6.11□□□□□ -1.43
FOXN3O00409 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.11□□□□□ -1.43
FOXN3O00409 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC6.11□□□□□ -1.43
FOXN3O00409 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
FOXN3O00409 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
FOXN3O00409 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.11□□□□□ -1.43
FOXN3O00409 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.11□□□□□ -1.43
FOXN3O00409 AC013437.2-201ENST00000639587 677 ntBASIC6.11□□□□□ -1.43
FOXN3O00409 AC068870.1-201ENST00000563737 2455 ntBASIC6.11□□□□□ -1.43
FOXN3O00409 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
FOXN3O00409 AC007342.7-201ENST00000624610 2337 ntBASIC6.11□□□□□ -1.43
FOXN3O00409 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
FOXN3O00409 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.11□□□□□ -1.43
FOXN3O00409 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
FOXN3O00409 AL359715.3-201ENST00000569267 2123 ntBASIC6.11□□□□□ -1.43
FOXN3O00409 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
FOXN3O00409 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
FOXN3O00409 DNM1P47-203ENST00000571780 12667 ntBASIC6.11□□□□□ -1.43
FOXN3O00409 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.11□□□□□ -1.43
FOXN3O00409 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
FOXN3O00409 CASC19-281ENST00000642118 1554 ntBASIC6.1□□□□□ -1.43
FOXN3O00409 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
FOXN3O00409 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
FOXN3O00409 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
FOXN3O00409 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
FOXN3O00409 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
FOXN3O00409 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
FOXN3O00409 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.1□□□□□ -1.43
FOXN3O00409 RNU6-1320P-201ENST00000390838 107 ntBASIC6.1□□□□□ -1.43
FOXN3O00409 RNU6-1269P-201ENST00000391139 107 ntBASIC6.1□□□□□ -1.43
FOXN3O00409 AC005042.1-201ENST00000393397 800 ntBASIC6.1□□□□□ -1.43
FOXN3O00409 OR7E156P-201ENST00000400303 464 ntBASIC6.1□□□□□ -1.43
FOXN3O00409 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
FOXN3O00409 RMRPP5-201ENST00000411156 267 ntBASIC6.1□□□□□ -1.43
FOXN3O00409 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.1□□□□□ -1.43
FOXN3O00409 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
FOXN3O00409 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.1□□□□□ -1.43
FOXN3O00409 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC6.1□□□□□ -1.43
FOXN3O00409 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.1□□□□□ -1.43
FOXN3O00409 AC115283.1-201ENST00000427353 400 ntBASIC6.1□□□□□ -1.43
FOXN3O00409 FO393414.1-201ENST00000428697 1184 ntBASIC6.1□□□□□ -1.43
FOXN3O00409 TRAPPC13P1-201ENST00000435991 1062 ntBASIC6.1□□□□□ -1.43
FOXN3O00409 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.1□□□□□ -1.43
FOXN3O00409 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
FOXN3O00409 RPL6P5-201ENST00000445678 828 ntBASIC6.1□□□□□ -1.43
FOXN3O00409 RNU6-599P-201ENST00000459383 107 ntBASIC6.1□□□□□ -1.43
FOXN3O00409 RNU6-1193P-201ENST00000459461 107 ntBASIC6.1□□□□□ -1.43
FOXN3O00409 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.1□□□□□ -1.43
FOXN3O00409 AC133963.2-201ENST00000513686 578 ntBASIC6.1□□□□□ -1.43
FOXN3O00409 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.1□□□□□ -1.43
FOXN3O00409 AC087894.1-201ENST00000538359 518 ntBASIC6.1□□□□□ -1.43
FOXN3O00409 AC084824.2-201ENST00000548906 345 ntBASIC6.1□□□□□ -1.43
FOXN3O00409 HSPE1P2-201ENST00000554777 306 ntBASIC6.1□□□□□ -1.43
FOXN3O00409 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.1□□□□□ -1.43
FOXN3O00409 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC6.1□□□□□ -1.43
FOXN3O00409 MIR4760-201ENST00000585040 80 ntBASIC6.1□□□□□ -1.43
FOXN3O00409 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.1□□□□□ -1.43
FOXN3O00409 AC245100.7-201ENST00000609678 442 ntBASIC6.1□□□□□ -1.43
FOXN3O00409 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
FOXN3O00409 RMST_10.1-201ENST00000616309 154 ntBASIC6.1□□□□□ -1.43
FOXN3O00409 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
FOXN3O00409 RNU6-368P-201ENST00000620928 107 ntBASIC6.1□□□□□ -1.43
FOXN3O00409 RNU6-538P-201ENST00000622329 107 ntBASIC6.1□□□□□ -1.43
FOXN3O00409 AC129778.1-202ENST00000623812 261 ntBASIC6.1□□□□□ -1.43
FOXN3O00409 AL591379.1-207ENST00000635982 261 ntBASIC6.1□□□□□ -1.43
FOXN3O00409 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.1□□□□□ -1.43
FOXN3O00409 METTL8-218ENST00000638989 876 ntTSL 5 BASIC6.1□□□□□ -1.43
FOXN3O00409 METTL8-219ENST00000640734 726 ntTSL 2 BASIC6.1□□□□□ -1.43
FOXN3O00409 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC6.1□□□□□ -1.43
FOXN3O00409 OR8G3P-202ENST00000641572 1255 ntBASIC6.1□□□□□ -1.43
FOXN3O00409 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.1□□□□□ -1.43
FOXN3O00409 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
FOXN3O00409 AC093849.1-201ENST00000563631 2209 ntBASIC6.1□□□□□ -1.43
FOXN3O00409 AC009962.1-201ENST00000567327 3813 ntBASIC6.1□□□□□ -1.43
FOXN3O00409 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms