Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 NPM1P18-201ENST00000434232 732 ntBASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 AC105399.1-202ENST00000447303 205 ntBASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 AL035090.1-201ENST00000454835 332 ntBASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 RN7SL51P-201ENST00000468230 285 ntBASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 EIF3LP3-201ENST00000495197 822 ntBASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 SCARNA21.2-201ENST00000516600 166 ntBASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 SCARNA16.4-201ENST00000516956 187 ntBASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 AP004607.2-201ENST00000533949 322 ntBASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 FAM60CP-201ENST00000591086 664 ntBASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 AC108738.1-201ENST00000603703 237 ntBASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 AC090953.1-201ENST00000604305 1092 ntBASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 AC067838.1-201ENST00000606064 577 ntBASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 AL159169.2-201ENST00000610061 1269 ntBASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 AC079395.2-201ENST00000610982 737 ntBASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 AC073869.7-201ENST00000640874 297 ntBASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 CIR1P2-201ENST00000514821 1342 ntBASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 SMG1P7-201ENST00000565246 2704 ntBASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 CASC19-248ENST00000641674 1356 ntBASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
ATG4BQ9Y4P1 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 RNU4-23P-201ENST00000362839 140 ntBASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 AL672167.2-201ENST00000377164 879 ntBASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 RNU6-729P-201ENST00000384399 107 ntBASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 MIR137-201ENST00000385223 102 ntBASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 DBIP1-201ENST00000401435 260 ntBASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 AL445213.1-201ENST00000412589 747 ntBASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 RPL12P17-201ENST00000432393 498 ntBASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 GSTM5P1-201ENST00000434751 660 ntBASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 AL672138.1-201ENST00000450604 1015 ntBASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 TAAR4P-201ENST00000454843 1039 ntBASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 AC100832.1-201ENST00000471945 383 ntBASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 AC092754.1-201ENST00000472975 479 ntBASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 EIF1P7-201ENST00000487533 337 ntBASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 RN7SL184P-201ENST00000488308 297 ntBASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 AC108693.1-201ENST00000496068 432 ntBASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 OR52A4P-203ENST00000498233 1014 ntBASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 HMGB1P44-201ENST00000508597 572 ntBASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 ASNSP4-201ENST00000511103 447 ntBASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 IGKV2-18-201ENST00000522607 343 ntBASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 OR4A43P-201ENST00000532938 908 ntBASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 BLZF2P-201ENST00000553776 1130 ntBASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 MIR7853-201ENST00000584820 132 ntBASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 AL356608.1-201ENST00000610034 820 ntBASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 MIR6826-201ENST00000617808 98 ntBASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 AL391597.1-201ENST00000618707 694 ntBASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
ATG4BQ9Y4P1 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 159.1 ms