Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 RN7SKP6-201ENST00000364795 319 ntBASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 MIR551A-201ENST00000385042 96 ntBASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 RNA5SP105-201ENST00000391123 113 ntBASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 GAPDHP42-201ENST00000406848 981 ntBASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 AC013470.3-201ENST00000420252 1194 ntBASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 RPL34P3-201ENST00000421454 338 ntBASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 AL133173.1-201ENST00000423458 397 ntBASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 AC017019.1-201ENST00000426129 261 ntBASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 OR6D1P-201ENST00000436165 939 ntBASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 SUMO2P3-201ENST00000438311 288 ntBASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 AC016772.1-201ENST00000444170 1261 ntBASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 AL450023.1-201ENST00000450868 751 ntBASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 PRPF38AP1-201ENST00000451976 933 ntBASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 AL358876.1-201ENST00000453364 1075 ntBASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 AL133244.1-201ENST00000456007 258 ntBASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 RPL5P22-201ENST00000480199 884 ntBASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 RPL15P21-201ENST00000495592 567 ntBASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 AP005403.1-201ENST00000579720 229 ntBASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 AC008833.1-201ENST00000611633 691 ntBASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 AC008115.3-201ENST00000614874 549 ntBASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 MIR1910-201ENST00000636955 80 ntBASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 OR13C1P-202ENST00000641378 2919 ntBASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 HSPA8P17-201ENST00000427029 1382 ntBASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 AC073136.1-201ENST00000449426 2884 ntBASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.73□□□□□ -1.65
RHBDD3Q9Y3P4 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 RNA5SP510-201ENST00000364697 99 ntBASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 SNORD56.6-201ENST00000384569 71 ntBASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 OR2AT2P-201ENST00000413438 905 ntBASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 COX5BP7-201ENST00000414780 274 ntBASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 AC092106.1-201ENST00000444291 373 ntBASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 RPL36AP39-201ENST00000445859 318 ntBASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 GAPDHP14-201ENST00000450472 937 ntBASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 AC022431.1-201ENST00000450941 438 ntBASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 LDHBP2-201ENST00000456969 1005 ntBASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 AC084754.1-201ENST00000463466 464 ntBASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 RN7SL809P-201ENST00000482040 297 ntBASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 AC022826.1-201ENST00000519383 805 ntBASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.72□□□□□ -1.65
RHBDD3Q9Y3P4 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms