Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AC234771.4-201ENST00000441416 730 ntBASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 RPL21P23-201ENST00000446654 460 ntBASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 AC005840.2-201ENST00000447193 355 ntBASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 MTCO1P27-201ENST00000448269 226 ntBASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 AL157714.2-204ENST00000452283 973 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 UCK2-205ENST00000469256 753 ntTSL 3 BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 AC092451.1-201ENST00000480211 153 ntBASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 AL163973.1-201ENST00000484753 577 ntBASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 RNU6-864P-201ENST00000516256 108 ntBASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 RNA5SP135-201ENST00000517019 125 ntBASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 AL109628.2-201ENST00000554037 201 ntBASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 AL845552.1-201ENST00000556820 323 ntBASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 AC007614.1-201ENST00000566607 309 ntTSL 3 BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 EIF1-207ENST00000591776 797 ntTSL 4 BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 OR7E94P-202ENST00000601375 790 ntBASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 AC073488.11-201ENST00000633298 754 ntBASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 HLA-B-257ENST00000640094 147 ntBASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 AC119674.1-212ENST00000641155 993 ntBASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 INPP5B-205ENST00000373027 3905 ntTSL 2 BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 SCOC-AS1-201ENST00000512692 1987 ntTSL 2 BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 ZFP42-202ENST00000509524 2480 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 CCDC39-201ENST00000442201 3279 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
VPS9D1Q9Y2B5 ZNF2-204ENST00000617923 3885 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 AL359091.1-201ENST00000449048 1734 ntBASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 ZNF207-202ENST00000342555 1905 ntTSL 5 BASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 IL31RA-205ENST00000396836 2426 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 INSIG2-201ENST00000245787 2590 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 OR14I1-201ENST00000342623 936 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 Y_RNA.25-201ENST00000362528 102 ntBASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 RNU6-492P-201ENST00000363035 104 ntBASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 Y_RNA.350-201ENST00000365409 98 ntBASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 RACK1-201ENST00000376817 965 ntTSL 5 BASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 Y_RNA.512-201ENST00000384518 102 ntBASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 RPS20P2-201ENST00000402520 389 ntBASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 AL031848.1-201ENST00000419034 351 ntTSL 5 BASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 AL049758.1-201ENST00000423154 397 ntBASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 VNN3-208ENST00000427187 1214 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 Z98752.2-201ENST00000432727 312 ntBASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 AL353754.1-201ENST00000440219 340 ntBASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 AC092601.1-201ENST00000444526 383 ntBASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 SLC31A1P1-201ENST00000451221 567 ntBASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 AC018695.1-201ENST00000484096 664 ntBASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 OR4D12P-201ENST00000509361 911 ntBASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 HSD3BP4-201ENST00000511509 1120 ntBASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 Y_RNA.665-201ENST00000516177 98 ntBASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 AP005597.3-201ENST00000532369 799 ntBASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 AC048344.2-201ENST00000547280 147 ntBASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 AC079313.2-202ENST00000552053 511 ntTSL 3 BASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 AC087565.1-201ENST00000565061 391 ntTSL 5 BASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 AC022165.1-201ENST00000568771 596 ntTSL 5 BASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 MIR3167-201ENST00000579623 85 ntBASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 AC069061.3-201ENST00000582254 823 ntBASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 MKNK2-211ENST00000591142 875 ntTSL 2 BASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 AC007785.1-201ENST00000597989 332 ntTSL 5 BASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 AC009686.2-201ENST00000607017 577 ntBASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 AC006157.1-201ENST00000611750 366 ntBASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 MIR6737-201ENST00000617385 70 ntBASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 ABCA4-207ENST00000536513 3740 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 FAM47C-201ENST00000358047 3270 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 DAPP1-201ENST00000296414 2955 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 PYHIN1-202ENST00000368138 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 XIST-206ENST00000434839 2865 ntTSL 5 BASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 AC008937.3-201ENST00000606813 1700 ntBASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 PSG5-201ENST00000342951 1626 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 AC119674.1-204ENST00000641348 1343 ntBASIC8.03□□□□□ -1.12
VPS9D1Q9Y2B5 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC8.02□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms