Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
NPIPA1Q9UND3 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
NPIPA1Q9UND3 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.03□□□□□ -1.6
NPIPA1Q9UND3 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.03□□□□□ -1.6
NPIPA1Q9UND3 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NPIPA1Q9UND3 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 AC009962.1-201ENST00000567327 3813 ntBASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 THAP12P8-201ENST00000447914 2115 ntBASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 AC005294.1-201ENST00000355509 281 ntBASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 RNA5SP507-201ENST00000363603 121 ntBASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 RNA5SP335-201ENST00000363817 110 ntBASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 U3.28-201ENST00000391249 210 ntBASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 MIR937-201ENST00000401271 86 ntBASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 AL009179.1-201ENST00000406085 265 ntBASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 AL390774.1-201ENST00000411924 246 ntBASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 AC096644.3-201ENST00000416788 338 ntBASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 AL355994.1-201ENST00000424379 260 ntBASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 IGBP1P3-201ENST00000447449 1000 ntBASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 RPS23P9-201ENST00000448848 438 ntBASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 FAR2P1-206ENST00000449736 709 ntBASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 RPS26P41-201ENST00000450370 284 ntBASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 AC091544.1-201ENST00000484702 348 ntBASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 RN7SL447P-201ENST00000494711 245 ntBASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 NDUFA5P12-201ENST00000503796 343 ntBASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 BNIP3P32-201ENST00000600015 554 ntBASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 AC067838.1-201ENST00000606064 577 ntBASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 MIR7155-201ENST00000615925 56 ntBASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 AC099654.6-201ENST00000636487 512 ntBASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 CASC19-222ENST00000641321 1173 ntBASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 MT-RNR2-201ENST00000387347 1559 ntBASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 AC068870.1-201ENST00000563737 2455 ntBASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 MTCO1P22-201ENST00000604619 1360 ntBASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
NPIPA1Q9UND3 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NPIPA1Q9UND3 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.01□□□□□ -1.61
NPIPA1Q9UND3 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.01□□□□□ -1.61
NPIPA1Q9UND3 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.01□□□□□ -1.61
NPIPA1Q9UND3 AC112255.1-201ENST00000624070 2493 ntBASIC5.01□□□□□ -1.61
NPIPA1Q9UND3 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
NPIPA1Q9UND3 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.01□□□□□ -1.61
NPIPA1Q9UND3 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
NPIPA1Q9UND3 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.01□□□□□ -1.61
NPIPA1Q9UND3 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
NPIPA1Q9UND3 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.01□□□□□ -1.61
NPIPA1Q9UND3 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NPIPA1Q9UND3 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NPIPA1Q9UND3 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NPIPA1Q9UND3 AC073429.2-201ENST00000569694 1444 ntBASIC5.01□□□□□ -1.61
NPIPA1Q9UND3 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NPIPA1Q9UND3 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NPIPA1Q9UND3 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
NPIPA1Q9UND3 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.01□□□□□ -1.61
NPIPA1Q9UND3 SNORA70.6-201ENST00000383934 134 ntBASIC5.01□□□□□ -1.61
NPIPA1Q9UND3 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
NPIPA1Q9UND3 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
NPIPA1Q9UND3 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.01□□□□□ -1.61
NPIPA1Q9UND3 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.01□□□□□ -1.61
NPIPA1Q9UND3 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.01□□□□□ -1.61
NPIPA1Q9UND3 AC234781.4-201ENST00000419384 244 ntBASIC5.01□□□□□ -1.61
NPIPA1Q9UND3 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.01□□□□□ -1.61
NPIPA1Q9UND3 AC006455.6-201ENST00000426192 893 ntBASIC5.01□□□□□ -1.61
NPIPA1Q9UND3 BX276092.6-201ENST00000430476 250 ntBASIC5.01□□□□□ -1.61
NPIPA1Q9UND3 FAM96AP1-201ENST00000430879 482 ntBASIC5.01□□□□□ -1.61
NPIPA1Q9UND3 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.01□□□□□ -1.61
NPIPA1Q9UND3 AC023271.1-201ENST00000445936 1090 ntBASIC5.01□□□□□ -1.61
NPIPA1Q9UND3 AC105399.1-202ENST00000447303 205 ntBASIC5.01□□□□□ -1.61
NPIPA1Q9UND3 MTND4LP12-201ENST00000448237 295 ntBASIC5.01□□□□□ -1.61
NPIPA1Q9UND3 BX276092.8-201ENST00000455722 250 ntBASIC5.01□□□□□ -1.61
NPIPA1Q9UND3 RN7SL188P-201ENST00000469842 285 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms