Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LRFN1Q9P244 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LRFN1Q9P244 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.59□□□□□ -1.51
LRFN1Q9P244 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
LRFN1Q9P244 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.59□□□□□ -1.51
LRFN1Q9P244 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LRFN1Q9P244 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LRFN1Q9P244 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
LRFN1Q9P244 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.59□□□□□ -1.51
LRFN1Q9P244 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LRFN1Q9P244 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.59□□□□□ -1.51
LRFN1Q9P244 AC119674.1-213ENST00000641177 1386 ntBASIC5.59□□□□□ -1.51
LRFN1Q9P244 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LRFN1Q9P244 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.59□□□□□ -1.51
LRFN1Q9P244 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LRFN1Q9P244 RNA5SP273-201ENST00000362484 113 ntBASIC5.59□□□□□ -1.51
LRFN1Q9P244 RNU5E-10P-201ENST00000363506 118 ntBASIC5.59□□□□□ -1.51
LRFN1Q9P244 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC5.59□□□□□ -1.51
LRFN1Q9P244 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
LRFN1Q9P244 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LRFN1Q9P244 AL512422.1-201ENST00000407033 553 ntBASIC5.59□□□□□ -1.51
LRFN1Q9P244 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.59□□□□□ -1.51
LRFN1Q9P244 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.59□□□□□ -1.51
LRFN1Q9P244 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.59□□□□□ -1.51
LRFN1Q9P244 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC5.59□□□□□ -1.51
LRFN1Q9P244 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.59□□□□□ -1.51
LRFN1Q9P244 HSFY3P-201ENST00000444242 1191 ntBASIC5.59□□□□□ -1.51
LRFN1Q9P244 ARL5AP2-201ENST00000444698 533 ntBASIC5.59□□□□□ -1.51
LRFN1Q9P244 AC073109.1-201ENST00000445066 978 ntBASIC5.59□□□□□ -1.51
LRFN1Q9P244 CASP3P1-201ENST00000446037 609 ntBASIC5.59□□□□□ -1.51
LRFN1Q9P244 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.59□□□□□ -1.51
LRFN1Q9P244 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.59□□□□□ -1.51
LRFN1Q9P244 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.59□□□□□ -1.51
LRFN1Q9P244 AC008280.2-201ENST00000455473 307 ntBASIC5.59□□□□□ -1.51
LRFN1Q9P244 AC073594.1-201ENST00000462065 364 ntBASIC5.59□□□□□ -1.51
LRFN1Q9P244 RPL21P6-201ENST00000479171 504 ntBASIC5.59□□□□□ -1.51
LRFN1Q9P244 AC104687.1-201ENST00000485829 412 ntBASIC5.59□□□□□ -1.51
LRFN1Q9P244 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.59□□□□□ -1.51
LRFN1Q9P244 PRELID3BP6-201ENST00000503839 571 ntBASIC5.59□□□□□ -1.51
LRFN1Q9P244 SUMO2P5-201ENST00000506790 245 ntBASIC5.59□□□□□ -1.51
LRFN1Q9P244 RN7SKP248-201ENST00000516278 305 ntBASIC5.59□□□□□ -1.51
LRFN1Q9P244 RNA5SP438-201ENST00000516561 112 ntBASIC5.59□□□□□ -1.51
LRFN1Q9P244 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.59□□□□□ -1.51
LRFN1Q9P244 WBP1LP3-201ENST00000523033 208 ntBASIC5.59□□□□□ -1.51
LRFN1Q9P244 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.59□□□□□ -1.51
LRFN1Q9P244 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.59□□□□□ -1.51
LRFN1Q9P244 AP005639.1-201ENST00000526939 192 ntBASIC5.59□□□□□ -1.51
LRFN1Q9P244 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.59□□□□□ -1.51
LRFN1Q9P244 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.59□□□□□ -1.51
LRFN1Q9P244 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.59□□□□□ -1.51
LRFN1Q9P244 AGGF1P7-201ENST00000562369 913 ntBASIC5.59□□□□□ -1.51
LRFN1Q9P244 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.59□□□□□ -1.51
LRFN1Q9P244 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.59□□□□□ -1.51
LRFN1Q9P244 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.59□□□□□ -1.51
LRFN1Q9P244 MIR4789-201ENST00000577469 82 ntBASIC5.59□□□□□ -1.51
LRFN1Q9P244 MIR3189-201ENST00000578735 73 ntBASIC5.59□□□□□ -1.51
LRFN1Q9P244 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.59□□□□□ -1.51
LRFN1Q9P244 ZNF92P3-201ENST00000596594 954 ntBASIC5.59□□□□□ -1.51
LRFN1Q9P244 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.59□□□□□ -1.51
LRFN1Q9P244 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.59□□□□□ -1.51
LRFN1Q9P244 AC100767.2-201ENST00000604840 693 ntBASIC5.59□□□□□ -1.51
LRFN1Q9P244 MIR6793-201ENST00000612376 63 ntBASIC5.59□□□□□ -1.51
LRFN1Q9P244 MIR6886-201ENST00000619864 61 ntBASIC5.59□□□□□ -1.51
LRFN1Q9P244 AL136228.1-201ENST00000622221 319 ntBASIC5.59□□□□□ -1.51
LRFN1Q9P244 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.59□□□□□ -1.51
LRFN1Q9P244 OR8G3P-202ENST00000641572 1255 ntBASIC5.59□□□□□ -1.51
LRFN1Q9P244 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LRFN1Q9P244 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
LRFN1Q9P244 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.59□□□□□ -1.51
LRFN1Q9P244 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LRFN1Q9P244 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.59□□□□□ -1.51
LRFN1Q9P244 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LRFN1Q9P244 AC083837.1-201ENST00000565297 2994 ntBASIC5.59□□□□□ -1.51
LRFN1Q9P244 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LRFN1Q9P244 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LRFN1Q9P244 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.59□□□□□ -1.51
LRFN1Q9P244 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LRFN1Q9P244 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
LRFN1Q9P244 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LRFN1Q9P244 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
LRFN1Q9P244 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
LRFN1Q9P244 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
LRFN1Q9P244 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LRFN1Q9P244 SEC63P2-201ENST00000503863 1939 ntBASIC5.58□□□□□ -1.52
LRFN1Q9P244 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
LRFN1Q9P244 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
LRFN1Q9P244 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
LRFN1Q9P244 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.58□□□□□ -1.52
LRFN1Q9P244 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LRFN1Q9P244 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LRFN1Q9P244 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
LRFN1Q9P244 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
LRFN1Q9P244 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.58□□□□□ -1.52
LRFN1Q9P244 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.58□□□□□ -1.52
LRFN1Q9P244 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
LRFN1Q9P244 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LRFN1Q9P244 RNU6-543P-201ENST00000362576 108 ntBASIC5.58□□□□□ -1.52
LRFN1Q9P244 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.58□□□□□ -1.52
LRFN1Q9P244 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
LRFN1Q9P244 RNU6-98P-201ENST00000384173 107 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms