Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AP001153.1-201ENST00000641024 338 ntBASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.07□□□□□ -1.44
BLOC1S4Q9NUP1 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 MIR133B-201ENST00000362210 119 ntBASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 MT-TP-201ENST00000387461 68 ntBASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 AC245517.2-201ENST00000442890 346 ntBASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 HESX1-202ENST00000473921 757 ntTSL 5 BASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 AC128716.1-201ENST00000475129 166 ntBASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 RN7SL466P-201ENST00000497546 295 ntBASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 IGBP1P4-201ENST00000503202 879 ntBASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 RNU6-889P-201ENST00000517189 103 ntBASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 IGKV3D-34-201ENST00000522638 302 ntBASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 AP004607.2-201ENST00000533949 322 ntBASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 AC068020.1-201ENST00000594215 661 ntBASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 AC130352.1-201ENST00000602979 661 ntBASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 AC034236.3-201ENST00000605999 461 ntBASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 AC010245.2-201ENST00000606908 1167 ntBASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 AC093775.1-201ENST00000624154 1868 ntBASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
BLOC1S4Q9NUP1 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 AC017002.4-201ENST00000604721 1525 ntBASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 OR4K12P-201ENST00000406538 961 ntBASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 RPS27AP6-201ENST00000427962 448 ntBASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 AL389925.1-201ENST00000432257 728 ntBASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 AC105399.1-202ENST00000447303 205 ntBASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 AC021205.1-201ENST00000468797 348 ntBASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 RN7SL717P-201ENST00000478343 297 ntBASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 MTCYBP19-201ENST00000517463 1124 ntBASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 OR10D4P-201ENST00000525892 951 ntBASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 BLZF2P-201ENST00000553776 1130 ntBASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 MIR4310-201ENST00000582950 57 ntBASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 MIR7853-201ENST00000584820 132 ntBASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 FAM72A-208ENST00000607379 1139 ntBASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.05□□□□□ -1.44
BLOC1S4Q9NUP1 AC244107.2-201ENST00000611773 76 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms