Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.48□□□□□ -1.53
CISHQ9NSE2 AC100784.1-201ENST00000522790 310 ntBASIC5.48□□□□□ -1.53
CISHQ9NSE2 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.48□□□□□ -1.53
CISHQ9NSE2 AC022832.1-201ENST00000530718 645 ntBASIC5.48□□□□□ -1.53
CISHQ9NSE2 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CISHQ9NSE2 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.48□□□□□ -1.53
CISHQ9NSE2 AC093524.1-201ENST00000564266 1094 ntBASIC5.48□□□□□ -1.53
CISHQ9NSE2 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.48□□□□□ -1.53
CISHQ9NSE2 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CISHQ9NSE2 AC015660.5-201ENST00000623238 564 ntBASIC5.48□□□□□ -1.53
CISHQ9NSE2 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.48□□□□□ -1.53
CISHQ9NSE2 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CISHQ9NSE2 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CISHQ9NSE2 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CISHQ9NSE2 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.47□□□□□ -1.53
CISHQ9NSE2 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CISHQ9NSE2 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.47□□□□□ -1.53
CISHQ9NSE2 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CISHQ9NSE2 CASC19-221ENST00000641309 1382 ntBASIC5.47□□□□□ -1.53
CISHQ9NSE2 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CISHQ9NSE2 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.47□□□□□ -1.53
CISHQ9NSE2 RN7SKP114-201ENST00000410327 279 ntBASIC5.47□□□□□ -1.53
CISHQ9NSE2 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.47□□□□□ -1.53
CISHQ9NSE2 PCNPP4-201ENST00000414817 517 ntBASIC5.47□□□□□ -1.53
CISHQ9NSE2 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CISHQ9NSE2 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.47□□□□□ -1.53
CISHQ9NSE2 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.47□□□□□ -1.53
CISHQ9NSE2 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.47□□□□□ -1.53
CISHQ9NSE2 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.47□□□□□ -1.53
CISHQ9NSE2 RPL5P25-201ENST00000441148 775 ntBASIC5.47□□□□□ -1.53
CISHQ9NSE2 RN7SL799P-201ENST00000475891 298 ntBASIC5.47□□□□□ -1.53
CISHQ9NSE2 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.47□□□□□ -1.53
CISHQ9NSE2 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.47□□□□□ -1.53
CISHQ9NSE2 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.47□□□□□ -1.53
CISHQ9NSE2 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.47□□□□□ -1.53
CISHQ9NSE2 IGLV2-28-201ENST00000520681 304 ntBASIC5.47□□□□□ -1.53
CISHQ9NSE2 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.47□□□□□ -1.53
CISHQ9NSE2 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.47□□□□□ -1.53
CISHQ9NSE2 SETP3-201ENST00000581726 813 ntBASIC5.47□□□□□ -1.53
CISHQ9NSE2 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.47□□□□□ -1.53
CISHQ9NSE2 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.47□□□□□ -1.53
CISHQ9NSE2 TAS2R6P-201ENST00000605022 826 ntBASIC5.47□□□□□ -1.53
CISHQ9NSE2 AC005899.7-201ENST00000618199 588 ntBASIC5.47□□□□□ -1.53
CISHQ9NSE2 FRG1EP-201ENST00000634469 770 ntBASIC5.47□□□□□ -1.53
CISHQ9NSE2 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CISHQ9NSE2 AC023632.6-201ENST00000624338 2177 ntBASIC5.47□□□□□ -1.53
CISHQ9NSE2 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CISHQ9NSE2 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.47□□□□□ -1.53
CISHQ9NSE2 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CISHQ9NSE2 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CISHQ9NSE2 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
CISHQ9NSE2 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.47□□□□□ -1.53
CISHQ9NSE2 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CISHQ9NSE2 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CISHQ9NSE2 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.47□□□□□ -1.53
CISHQ9NSE2 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CISHQ9NSE2 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CISHQ9NSE2 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CISHQ9NSE2 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.46□□□□□ -1.53
CISHQ9NSE2 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.46□□□□□ -1.53
CISHQ9NSE2 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CISHQ9NSE2 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.46□□□□□ -1.53
CISHQ9NSE2 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.46□□□□□ -1.53
CISHQ9NSE2 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CISHQ9NSE2 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.54
CISHQ9NSE2 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.46□□□□□ -1.54
CISHQ9NSE2 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
CISHQ9NSE2 AC002525.1-201ENST00000624392 1622 ntBASIC5.46□□□□□ -1.54
CISHQ9NSE2 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CISHQ9NSE2 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CISHQ9NSE2 U8.4-201ENST00000363626 134 ntBASIC5.46□□□□□ -1.54
CISHQ9NSE2 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
CISHQ9NSE2 SNORA2.3-201ENST00000383920 135 ntBASIC5.46□□□□□ -1.54
CISHQ9NSE2 RPL21P67-201ENST00000402896 478 ntBASIC5.46□□□□□ -1.54
CISHQ9NSE2 AL035079.1-201ENST00000405210 287 ntBASIC5.46□□□□□ -1.54
CISHQ9NSE2 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.46□□□□□ -1.54
CISHQ9NSE2 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.46□□□□□ -1.54
CISHQ9NSE2 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.46□□□□□ -1.54
CISHQ9NSE2 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.46□□□□□ -1.54
CISHQ9NSE2 AC002075.1-201ENST00000457396 676 ntBASIC5.46□□□□□ -1.54
CISHQ9NSE2 RN7SL443P-201ENST00000464331 290 ntBASIC5.46□□□□□ -1.54
CISHQ9NSE2 AC097484.1-201ENST00000471148 389 ntBASIC5.46□□□□□ -1.54
CISHQ9NSE2 AC074386.1-201ENST00000476560 767 ntBASIC5.46□□□□□ -1.54
CISHQ9NSE2 AC005412.2-201ENST00000492004 341 ntBASIC5.46□□□□□ -1.54
CISHQ9NSE2 RPS4XP14-201ENST00000493072 781 ntBASIC5.46□□□□□ -1.54
CISHQ9NSE2 NIFKP7-201ENST00000503365 834 ntBASIC5.46□□□□□ -1.54
CISHQ9NSE2 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.46□□□□□ -1.54
CISHQ9NSE2 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.46□□□□□ -1.54
CISHQ9NSE2 HAUS8P1-201ENST00000549005 542 ntBASIC5.46□□□□□ -1.54
CISHQ9NSE2 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.46□□□□□ -1.54
CISHQ9NSE2 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.46□□□□□ -1.54
CISHQ9NSE2 AC114947.2-201ENST00000565748 2125 ntBASIC5.46□□□□□ -1.54
CISHQ9NSE2 AC011447.4-201ENST00000587562 111 ntBASIC5.46□□□□□ -1.54
CISHQ9NSE2 AL139407.1-201ENST00000613826 1175 ntBASIC5.46□□□□□ -1.54
CISHQ9NSE2 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CISHQ9NSE2 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CISHQ9NSE2 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CISHQ9NSE2 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.46□□□□□ -1.54
CISHQ9NSE2 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CISHQ9NSE2 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms