Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.6□□□□□ -1.35
VTA1Q9NP79 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.6□□□□□ -1.35
VTA1Q9NP79 ELOCP13-201ENST00000443934 329 ntBASIC6.6□□□□□ -1.35
VTA1Q9NP79 AC005297.1-201ENST00000444765 862 ntBASIC6.6□□□□□ -1.35
VTA1Q9NP79 FRG2FP-204ENST00000453982 852 ntBASIC6.6□□□□□ -1.35
VTA1Q9NP79 EIF1P7-201ENST00000487533 337 ntBASIC6.6□□□□□ -1.35
VTA1Q9NP79 AC093720.1-201ENST00000505681 714 ntBASIC6.6□□□□□ -1.35
VTA1Q9NP79 AC147055.3-201ENST00000510547 851 ntBASIC6.6□□□□□ -1.35
VTA1Q9NP79 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.6□□□□□ -1.35
VTA1Q9NP79 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.6□□□□□ -1.35
VTA1Q9NP79 SCARNA6.1-201ENST00000516989 238 ntBASIC6.6□□□□□ -1.35
VTA1Q9NP79 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.6□□□□□ -1.35
VTA1Q9NP79 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC6.6□□□□□ -1.35
VTA1Q9NP79 MTND2P38-201ENST00000522536 667 ntBASIC6.6□□□□□ -1.35
VTA1Q9NP79 EEF1A1P37-201ENST00000522748 715 ntBASIC6.6□□□□□ -1.35
VTA1Q9NP79 HAUS1P3-201ENST00000523909 662 ntBASIC6.6□□□□□ -1.35
VTA1Q9NP79 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.6□□□□□ -1.35
VTA1Q9NP79 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.6□□□□□ -1.35
VTA1Q9NP79 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
VTA1Q9NP79 AP003717.3-201ENST00000544832 1180 ntBASIC6.6□□□□□ -1.35
VTA1Q9NP79 AL049830.4-201ENST00000555149 351 ntBASIC6.6□□□□□ -1.35
VTA1Q9NP79 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.6□□□□□ -1.35
VTA1Q9NP79 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.6□□□□□ -1.35
VTA1Q9NP79 MIR4301-201ENST00000577203 66 ntBASIC6.6□□□□□ -1.35
VTA1Q9NP79 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC6.6□□□□□ -1.35
VTA1Q9NP79 MIR1273E-201ENST00000581165 102 ntBASIC6.6□□□□□ -1.35
VTA1Q9NP79 BNIP3P32-201ENST00000600015 554 ntBASIC6.6□□□□□ -1.35
VTA1Q9NP79 SNX6P1-201ENST00000601728 1224 ntBASIC6.6□□□□□ -1.35
VTA1Q9NP79 SUMO2P15-201ENST00000604285 278 ntBASIC6.6□□□□□ -1.35
VTA1Q9NP79 AC005899.7-201ENST00000618199 588 ntBASIC6.6□□□□□ -1.35
VTA1Q9NP79 Z99129.2-201ENST00000619967 314 ntBASIC6.6□□□□□ -1.35
VTA1Q9NP79 AL356863.1-201ENST00000623378 1080 ntBASIC6.6□□□□□ -1.35
VTA1Q9NP79 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC6.6□□□□□ -1.35
VTA1Q9NP79 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
VTA1Q9NP79 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
VTA1Q9NP79 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
VTA1Q9NP79 AC003973.3-201ENST00000624863 2822 ntBASIC6.6□□□□□ -1.35
VTA1Q9NP79 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.6□□□□□ -1.35
VTA1Q9NP79 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
VTA1Q9NP79 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
VTA1Q9NP79 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.6□□□□□ -1.35
VTA1Q9NP79 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
VTA1Q9NP79 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.6□□□□□ -1.35
VTA1Q9NP79 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
VTA1Q9NP79 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
VTA1Q9NP79 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
VTA1Q9NP79 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.35
VTA1Q9NP79 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
VTA1Q9NP79 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
VTA1Q9NP79 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
VTA1Q9NP79 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
VTA1Q9NP79 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.59□□□□□ -1.35
VTA1Q9NP79 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
VTA1Q9NP79 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.59□□□□□ -1.35
VTA1Q9NP79 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.59□□□□□ -1.35
VTA1Q9NP79 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.59□□□□□ -1.35
VTA1Q9NP79 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
VTA1Q9NP79 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.35
VTA1Q9NP79 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
VTA1Q9NP79 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
VTA1Q9NP79 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.59□□□□□ -1.35
VTA1Q9NP79 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
VTA1Q9NP79 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.59□□□□□ -1.35
VTA1Q9NP79 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.59□□□□□ -1.35
VTA1Q9NP79 RN7SKP162-201ENST00000363605 345 ntBASIC6.59□□□□□ -1.35
VTA1Q9NP79 RNU4-31P-201ENST00000384211 141 ntBASIC6.59□□□□□ -1.35
VTA1Q9NP79 AL034403.1-201ENST00000399414 885 ntBASIC6.59□□□□□ -1.35
VTA1Q9NP79 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.59□□□□□ -1.35
VTA1Q9NP79 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC6.59□□□□□ -1.35
VTA1Q9NP79 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC6.59□□□□□ -1.35
VTA1Q9NP79 TNPO1P1-201ENST00000423641 1138 ntBASIC6.59□□□□□ -1.35
VTA1Q9NP79 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC6.59□□□□□ -1.35
VTA1Q9NP79 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.59□□□□□ -1.35
VTA1Q9NP79 FO393414.1-201ENST00000428697 1184 ntBASIC6.59□□□□□ -1.35
VTA1Q9NP79 AC023141.8-201ENST00000442554 208 ntBASIC6.59□□□□□ -1.35
VTA1Q9NP79 AL163193.1-201ENST00000444895 788 ntBASIC6.59□□□□□ -1.35
VTA1Q9NP79 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.59□□□□□ -1.35
VTA1Q9NP79 RN7SL72P-201ENST00000460697 269 ntBASIC6.59□□□□□ -1.35
VTA1Q9NP79 PFN1P6-201ENST00000476786 399 ntBASIC6.59□□□□□ -1.35
VTA1Q9NP79 METTL15P1-201ENST00000481421 1045 ntBASIC6.59□□□□□ -1.35
VTA1Q9NP79 AC108693.1-201ENST00000496068 432 ntBASIC6.59□□□□□ -1.35
VTA1Q9NP79 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.59□□□□□ -1.35
VTA1Q9NP79 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.59□□□□□ -1.35
VTA1Q9NP79 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.59□□□□□ -1.35
VTA1Q9NP79 RNU6-276P-201ENST00000516114 96 ntBASIC6.59□□□□□ -1.35
VTA1Q9NP79 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.59□□□□□ -1.35
VTA1Q9NP79 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC6.59□□□□□ -1.35
VTA1Q9NP79 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.59□□□□□ -1.35
VTA1Q9NP79 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.59□□□□□ -1.35
VTA1Q9NP79 AGGF1P5-201ENST00000567900 919 ntBASIC6.59□□□□□ -1.35
VTA1Q9NP79 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.59□□□□□ -1.35
VTA1Q9NP79 AC025175.1-201ENST00000606482 759 ntBASIC6.59□□□□□ -1.35
VTA1Q9NP79 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.59□□□□□ -1.35
VTA1Q9NP79 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.59□□□□□ -1.35
VTA1Q9NP79 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.59□□□□□ -1.35
VTA1Q9NP79 AC132825.7-201ENST00000638744 335 ntBASIC6.59□□□□□ -1.35
VTA1Q9NP79 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
VTA1Q9NP79 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
VTA1Q9NP79 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.59□□□□□ -1.35
VTA1Q9NP79 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms