Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LRTM1Q9HBL6 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
LRTM1Q9HBL6 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.07□□□□□ -1.6
LRTM1Q9HBL6 MTHFD2P5-201ENST00000320415 844 ntBASIC5.07□□□□□ -1.6
LRTM1Q9HBL6 RNA5SP223-201ENST00000365174 120 ntBASIC5.07□□□□□ -1.6
LRTM1Q9HBL6 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LRTM1Q9HBL6 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
LRTM1Q9HBL6 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.07□□□□□ -1.6
LRTM1Q9HBL6 OR3A2-201ENST00000408891 1076 ntBASIC5.07□□□□□ -1.6
LRTM1Q9HBL6 RNA5SP487-201ENST00000410186 122 ntBASIC5.07□□□□□ -1.6
LRTM1Q9HBL6 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.07□□□□□ -1.6
LRTM1Q9HBL6 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.07□□□□□ -1.6
LRTM1Q9HBL6 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.07□□□□□ -1.6
LRTM1Q9HBL6 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.07□□□□□ -1.6
LRTM1Q9HBL6 AL355433.1-201ENST00000422804 300 ntBASIC5.07□□□□□ -1.6
LRTM1Q9HBL6 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.07□□□□□ -1.6
LRTM1Q9HBL6 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.07□□□□□ -1.6
LRTM1Q9HBL6 AC046176.1-201ENST00000435260 1170 ntBASIC5.07□□□□□ -1.6
LRTM1Q9HBL6 TCEA1P3-201ENST00000443005 880 ntBASIC5.07□□□□□ -1.6
LRTM1Q9HBL6 AC021660.1-201ENST00000465006 554 ntBASIC5.07□□□□□ -1.6
LRTM1Q9HBL6 ASNSP4-201ENST00000511103 447 ntBASIC5.07□□□□□ -1.6
LRTM1Q9HBL6 AC074087.1-201ENST00000512059 724 ntBASIC5.07□□□□□ -1.6
LRTM1Q9HBL6 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.07□□□□□ -1.6
LRTM1Q9HBL6 BLZF2P-201ENST00000553776 1130 ntBASIC5.07□□□□□ -1.6
LRTM1Q9HBL6 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
LRTM1Q9HBL6 RN7SL708P-201ENST00000580952 299 ntBASIC5.07□□□□□ -1.6
LRTM1Q9HBL6 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.07□□□□□ -1.6
LRTM1Q9HBL6 SUMO2P15-201ENST00000604285 278 ntBASIC5.07□□□□□ -1.6
LRTM1Q9HBL6 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
LRTM1Q9HBL6 MTCO1P1-201ENST00000624263 1081 ntBASIC5.07□□□□□ -1.6
LRTM1Q9HBL6 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.07□□□□□ -1.6
LRTM1Q9HBL6 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LRTM1Q9HBL6 AC073136.1-201ENST00000449426 2884 ntBASIC5.07□□□□□ -1.6
LRTM1Q9HBL6 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.07□□□□□ -1.6
LRTM1Q9HBL6 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
LRTM1Q9HBL6 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
LRTM1Q9HBL6 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LRTM1Q9HBL6 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
LRTM1Q9HBL6 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LRTM1Q9HBL6 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.06□□□□□ -1.6
LRTM1Q9HBL6 AC008079.2-201ENST00000623543 20396 ntBASIC5.06□□□□□ -1.6
LRTM1Q9HBL6 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
LRTM1Q9HBL6 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LRTM1Q9HBL6 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.06□□□□□ -1.6
LRTM1Q9HBL6 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LRTM1Q9HBL6 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.06□□□□□ -1.6
LRTM1Q9HBL6 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.06□□□□□ -1.6
LRTM1Q9HBL6 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
LRTM1Q9HBL6 OR4K12P-201ENST00000406538 961 ntBASIC5.06□□□□□ -1.6
LRTM1Q9HBL6 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.06□□□□□ -1.6
LRTM1Q9HBL6 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.06□□□□□ -1.6
LRTM1Q9HBL6 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.06□□□□□ -1.6
LRTM1Q9HBL6 AL390119.1-201ENST00000440329 312 ntBASIC5.06□□□□□ -1.6
LRTM1Q9HBL6 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.06□□□□□ -1.6
LRTM1Q9HBL6 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC5.06□□□□□ -1.6
LRTM1Q9HBL6 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.06□□□□□ -1.6
LRTM1Q9HBL6 AC104634.1-201ENST00000452720 462 ntBASIC5.06□□□□□ -1.6
LRTM1Q9HBL6 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.06□□□□□ -1.6
LRTM1Q9HBL6 RN7SL189P-201ENST00000468631 289 ntBASIC5.06□□□□□ -1.6
LRTM1Q9HBL6 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
LRTM1Q9HBL6 RPL7P40-201ENST00000481703 745 ntBASIC5.06□□□□□ -1.6
LRTM1Q9HBL6 NIFKP7-201ENST00000503365 834 ntBASIC5.06□□□□□ -1.6
LRTM1Q9HBL6 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.06□□□□□ -1.6
LRTM1Q9HBL6 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.06□□□□□ -1.6
LRTM1Q9HBL6 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.06□□□□□ -1.6
LRTM1Q9HBL6 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.06□□□□□ -1.6
LRTM1Q9HBL6 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
LRTM1Q9HBL6 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.06□□□□□ -1.6
LRTM1Q9HBL6 AC006210.2-201ENST00000367074 1545 ntBASIC5.06□□□□□ -1.6
LRTM1Q9HBL6 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LRTM1Q9HBL6 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
LRTM1Q9HBL6 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LRTM1Q9HBL6 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
LRTM1Q9HBL6 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LRTM1Q9HBL6 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.05□□□□□ -1.6
LRTM1Q9HBL6 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
LRTM1Q9HBL6 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LRTM1Q9HBL6 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.05□□□□□ -1.6
LRTM1Q9HBL6 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
LRTM1Q9HBL6 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LRTM1Q9HBL6 MGAT2P2-201ENST00000427194 797 ntBASIC5.05□□□□□ -1.6
LRTM1Q9HBL6 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.05□□□□□ -1.6
LRTM1Q9HBL6 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.05□□□□□ -1.6
LRTM1Q9HBL6 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.05□□□□□ -1.6
LRTM1Q9HBL6 BX842559.2-201ENST00000451418 605 ntBASIC5.05□□□□□ -1.6
LRTM1Q9HBL6 RANP1-206ENST00000455094 651 ntBASIC5.05□□□□□ -1.6
LRTM1Q9HBL6 AC108161.1-201ENST00000461060 402 ntBASIC5.05□□□□□ -1.6
LRTM1Q9HBL6 RPL32P9-201ENST00000487963 407 ntBASIC5.05□□□□□ -1.6
LRTM1Q9HBL6 RPS26P24-201ENST00000497656 331 ntBASIC5.05□□□□□ -1.6
LRTM1Q9HBL6 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.05□□□□□ -1.6
LRTM1Q9HBL6 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.05□□□□□ -1.6
LRTM1Q9HBL6 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.05□□□□□ -1.6
LRTM1Q9HBL6 HMGB1P40-201ENST00000525121 540 ntBASIC5.05□□□□□ -1.6
LRTM1Q9HBL6 RBM22P1-201ENST00000578589 1214 ntBASIC5.05□□□□□ -1.6
LRTM1Q9HBL6 FO393422.1-201ENST00000603908 708 ntBASIC5.05□□□□□ -1.6
LRTM1Q9HBL6 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.05□□□□□ -1.6
LRTM1Q9HBL6 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.05□□□□□ -1.6
LRTM1Q9HBL6 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LRTM1Q9HBL6 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
LRTM1Q9HBL6 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 147.6 ms