Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CHMP4AQ9BY43 AC008115.3-201ENST00000614874 549 ntBASIC7.32□□□□□ -1.24
CHMP4AQ9BY43 AC005725.1-201ENST00000577346 2607 ntBASIC7.32□□□□□ -1.24
CHMP4AQ9BY43 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
CHMP4AQ9BY43 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CHMP4AQ9BY43 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CHMP4AQ9BY43 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CHMP4AQ9BY43 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CHMP4AQ9BY43 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CHMP4AQ9BY43 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 AC140134.1-201ENST00000511830 3544 ntBASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 YES1P1-201ENST00000418510 1628 ntBASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 SNORA64.1-201ENST00000362600 132 ntBASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 AL589655.1-201ENST00000405398 482 ntBASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 TRAPPC2P10-201ENST00000415662 323 ntBASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 TNPO1P1-201ENST00000423641 1138 ntBASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 CHEK2P5-201ENST00000423877 246 ntBASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 TRAPPC2P5-201ENST00000426293 308 ntBASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 SUMO2P3-201ENST00000438311 288 ntBASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 KRT8P51-201ENST00000438938 274 ntBASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 PSMC1P13-201ENST00000458195 985 ntBASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 RN7SL174P-201ENST00000475578 289 ntBASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 RN7SL101P-201ENST00000496350 279 ntBASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 RNU6-760P-201ENST00000516078 97 ntBASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 RBM22P12-201ENST00000567098 1255 ntBASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 MIR4311-201ENST00000580794 100 ntBASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 H3F3BP2-201ENST00000583907 357 ntBASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 HIRAP1-201ENST00000605318 787 ntBASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 MIR6768-201ENST00000610734 72 ntBASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 AL603750.1-201ENST00000624216 1717 ntBASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 UOX-205ENST00000640983 544 ntTSL 4 BASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CHMP4AQ9BY43 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CHMP4AQ9BY43 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CHMP4AQ9BY43 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
CHMP4AQ9BY43 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CHMP4AQ9BY43 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
CHMP4AQ9BY43 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC7.3□□□□□ -1.24
CHMP4AQ9BY43 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
CHMP4AQ9BY43 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
CHMP4AQ9BY43 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CHMP4AQ9BY43 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
CHMP4AQ9BY43 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC7.3□□□□□ -1.24
CHMP4AQ9BY43 MIR130A-201ENST00000385274 89 ntBASIC7.3□□□□□ -1.24
CHMP4AQ9BY43 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
CHMP4AQ9BY43 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CHMP4AQ9BY43 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC7.3□□□□□ -1.24
CHMP4AQ9BY43 RMRPP5-201ENST00000411156 267 ntBASIC7.3□□□□□ -1.24
CHMP4AQ9BY43 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC7.3□□□□□ -1.24
CHMP4AQ9BY43 AL596448.1-201ENST00000415024 392 ntBASIC7.3□□□□□ -1.24
CHMP4AQ9BY43 AL590609.2-201ENST00000421430 368 ntBASIC7.3□□□□□ -1.24
CHMP4AQ9BY43 AL391987.1-201ENST00000441025 200 ntBASIC7.3□□□□□ -1.24
CHMP4AQ9BY43 AC245517.2-201ENST00000442890 346 ntBASIC7.3□□□□□ -1.24
CHMP4AQ9BY43 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CHMP4AQ9BY43 RPL7AP52-201ENST00000458096 790 ntBASIC7.3□□□□□ -1.24
CHMP4AQ9BY43 RNU7-27P-201ENST00000459281 62 ntBASIC7.3□□□□□ -1.24
CHMP4AQ9BY43 RN7SL515P-201ENST00000463999 297 ntBASIC7.3□□□□□ -1.24
CHMP4AQ9BY43 ATP5LP5-201ENST00000483050 299 ntBASIC7.3□□□□□ -1.24
CHMP4AQ9BY43 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC7.3□□□□□ -1.24
CHMP4AQ9BY43 RPS27AP16-201ENST00000492222 470 ntBASIC7.3□□□□□ -1.24
CHMP4AQ9BY43 RN7SL466P-201ENST00000497546 295 ntBASIC7.3□□□□□ -1.24
CHMP4AQ9BY43 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC7.3□□□□□ -1.24
CHMP4AQ9BY43 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC7.3□□□□□ -1.24
CHMP4AQ9BY43 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC7.3□□□□□ -1.24
CHMP4AQ9BY43 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
CHMP4AQ9BY43 NPM1P42-201ENST00000560329 862 ntBASIC7.3□□□□□ -1.24
CHMP4AQ9BY43 AC015720.2-201ENST00000567709 334 ntBASIC7.3□□□□□ -1.24
CHMP4AQ9BY43 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC7.3□□□□□ -1.24
CHMP4AQ9BY43 AC005229.3-201ENST00000603438 323 ntBASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms