Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 MIR3689C-201ENST00000581239 72 ntBASIC3.99□□□□□ -1.77
LITAFQ99732 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.99□□□□□ -1.77
LITAFQ99732 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC3.99□□□□□ -1.77
LITAFQ99732 AC010487.1-201ENST00000594408 1172 ntBASIC3.99□□□□□ -1.77
LITAFQ99732 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LITAFQ99732 AL512430.4-201ENST00000603085 613 ntBASIC3.99□□□□□ -1.77
LITAFQ99732 AC008555.7-201ENST00000605008 583 ntBASIC3.99□□□□□ -1.77
LITAFQ99732 AL158042.1-201ENST00000605338 460 ntBASIC3.99□□□□□ -1.77
LITAFQ99732 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LITAFQ99732 AC010245.2-201ENST00000606908 1167 ntBASIC3.99□□□□□ -1.77
LITAFQ99732 AC022106.1-201ENST00000612834 766 ntBASIC3.99□□□□□ -1.77
LITAFQ99732 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC3.99□□□□□ -1.77
LITAFQ99732 AP000676.3-201ENST00000623299 569 ntBASIC3.99□□□□□ -1.77
LITAFQ99732 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC3.99□□□□□ -1.77
LITAFQ99732 FKBP1AP4-201ENST00000631775 336 ntBASIC3.99□□□□□ -1.77
LITAFQ99732 AC063952.1-203ENST00000634410 658 ntBASIC3.99□□□□□ -1.77
LITAFQ99732 MIR1322-201ENST00000638013 71 ntBASIC3.99□□□□□ -1.77
LITAFQ99732 AC137056.2-201ENST00000624055 1958 ntBASIC3.99□□□□□ -1.77
LITAFQ99732 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC3.99□□□□□ -1.77
LITAFQ99732 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC3.99□□□□□ -1.77
LITAFQ99732 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.99□□□□□ -1.77
LITAFQ99732 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
LITAFQ99732 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC3.99□□□□□ -1.77
LITAFQ99732 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC3.99□□□□□ -1.77
LITAFQ99732 Z98755.1-201ENST00000407015 1384 ntBASIC3.99□□□□□ -1.77
LITAFQ99732 AC111188.2-201ENST00000529697 1387 ntBASIC3.99□□□□□ -1.77
LITAFQ99732 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LITAFQ99732 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC3.99□□□□□ -1.77
LITAFQ99732 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LITAFQ99732 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
LITAFQ99732 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
LITAFQ99732 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC3.98□□□□□ -1.77
LITAFQ99732 OSBPL9P1-201ENST00000604744 1469 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC3.98□□□□□ -1.77
LITAFQ99732 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LITAFQ99732 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC3.98□□□□□ -1.77
LITAFQ99732 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
LITAFQ99732 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
LITAFQ99732 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC3.98□□□□□ -1.77
LITAFQ99732 AC239868.2-201ENST00000564237 4527 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 AC125336.1-201ENST00000508893 2827 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 OR5E1P-201ENST00000305754 927 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
LITAFQ99732 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LITAFQ99732 RNU1-87P-201ENST00000363727 170 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 Y_RNA.318-201ENST00000365131 97 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 RNA5SP355-201ENST00000365317 135 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LITAFQ99732 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LITAFQ99732 RNU6-83P-201ENST00000384568 112 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 RNU6-244P-201ENST00000391028 104 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 PCNAP3-201ENST00000397222 778 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LITAFQ99732 AL079341.1-201ENST00000404701 1207 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 HNRNPDP2-201ENST00000406475 478 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LITAFQ99732 AL034372.1-201ENST00000407586 754 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 RN7SKP121-201ENST00000410842 305 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC3.98□□□□□ -1.77
LITAFQ99732 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC3.98□□□□□ -1.77
LITAFQ99732 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.98□□□□□ -1.77
LITAFQ99732 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LITAFQ99732 TAF13P2-201ENST00000416876 286 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 CLCN3P1-201ENST00000423965 1017 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 RAC1P8-201ENST00000427086 527 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC3.98□□□□□ -1.77
LITAFQ99732 MOB1AP1-201ENST00000430903 535 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC3.98□□□□□ -1.77
LITAFQ99732 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LITAFQ99732 SLC25A24P1-202ENST00000434803 1220 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.98□□□□□ -1.77
LITAFQ99732 MYO5BP2-201ENST00000449815 1277 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 AC239798.3-201ENST00000454459 408 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC3.98□□□□□ -1.77
LITAFQ99732 RNU7-140P-201ENST00000459546 60 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 RPS20P23-201ENST00000461683 354 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 AC107015.1-201ENST00000466902 747 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 RN7SL643P-201ENST00000471845 291 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 RN7SL326P-201ENST00000477493 296 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LITAFQ99732 AC069528.1-202ENST00000482888 637 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.98□□□□□ -1.77
LITAFQ99732 AC106799.2-201ENST00000507435 721 ntTSL 5 BASIC3.98□□□□□ -1.77
LITAFQ99732 B3GNTL1P1-201ENST00000509174 289 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 AC093878.1-201ENST00000515630 432 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 HMGB1P1-201ENST00000522557 636 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.98□□□□□ -1.77
LITAFQ99732 NPIPB14P-203ENST00000532298 987 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.98□□□□□ -1.77
LITAFQ99732 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC3.98□□□□□ -1.77
LITAFQ99732 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
LITAFQ99732 LSM3P2-201ENST00000551246 273 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 SETP1-201ENST00000556014 845 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC3.98□□□□□ -1.77
LITAFQ99732 AC023968.1-201ENST00000560719 475 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 HNRNPA1P74-201ENST00000560782 835 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 AC009852.2-201ENST00000567898 485 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC3.98□□□□□ -1.77
LITAFQ99732 AL354943.1-201ENST00000572103 781 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms