Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 RNFT1P3-201ENST00000340898 1052 ntBASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 RNA5SP477-201ENST00000362639 119 ntBASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 RN7SKP15-201ENST00000364742 309 ntBASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 SNORA70.9-201ENST00000384370 135 ntBASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 AL139039.2-201ENST00000407436 479 ntBASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 MYL6P5-201ENST00000412707 459 ntBASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 AL356320.2-201ENST00000417263 507 ntBASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 USP9YP26-201ENST00000421008 661 ntBASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 AC066692.1-201ENST00000421721 457 ntBASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 RPL5P2-201ENST00000429598 854 ntBASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 SNRPFP2-201ENST00000440710 251 ntBASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 SUMO2P1-206ENST00000445436 284 ntBASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 AC144530.1-201ENST00000452862 555 ntBASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 OR5H7P-201ENST00000514084 930 ntBASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 RNA5SP271-201ENST00000516700 88 ntBASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 AC022880.1-201ENST00000534017 973 ntBASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 AC023161.2-201ENST00000551218 780 ntBASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 HMGN2P47-201ENST00000559378 272 ntBASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 MTATP6P3-201ENST00000581686 676 ntBASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 AL021997.1-201ENST00000605757 193 ntBASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 OR2AS2P-201ENST00000606902 342 ntBASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 AP001596.2-201ENST00000608410 312 ntBASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 AC245389.2-201ENST00000616023 576 ntBASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 AC242843.1-201ENST00000618702 573 ntBASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 AC026367.3-201ENST00000619032 590 ntBASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CDK5RAP1Q96SZ6 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
CDK5RAP1Q96SZ6 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 HMGB1P13-201ENST00000406019 642 ntBASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 BX284632.2-201ENST00000421091 399 ntBASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 AC016027.5-201ENST00000427227 210 ntBASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 FO393414.1-201ENST00000428697 1184 ntBASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 AC005345.1-201ENST00000431868 217 ntBASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 USP9YP24-201ENST00000434374 697 ntBASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 AL031667.1-201ENST00000440222 725 ntBASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 AL512605.1-202ENST00000441919 381 ntBASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 BMS1P10-201ENST00000443754 1120 ntBASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 HSFY3P-201ENST00000444242 1191 ntBASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 USP9YP17-201ENST00000444617 696 ntBASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 AL359955.2-201ENST00000445380 353 ntBASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC6.27□□□□□ -1.41
CDK5RAP1Q96SZ6 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms