Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 SUGT1P2-201ENST00000379452 992 ntBASIC8.15□□□□□ -1.1
TRIM47Q96LD4 RNU6-574P-201ENST00000384265 107 ntBASIC8.15□□□□□ -1.1
TRIM47Q96LD4 AC005522.1-201ENST00000395416 346 ntBASIC8.15□□□□□ -1.1
TRIM47Q96LD4 RN7SKP86-201ENST00000410454 332 ntBASIC8.15□□□□□ -1.1
TRIM47Q96LD4 RN7SKP279-201ENST00000411383 298 ntBASIC8.15□□□□□ -1.1
TRIM47Q96LD4 AC068138.1-201ENST00000412635 217 ntBASIC8.15□□□□□ -1.1
TRIM47Q96LD4 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC8.15□□□□□ -1.1
TRIM47Q96LD4 RPS7P13-201ENST00000413955 498 ntBASIC8.15□□□□□ -1.1
TRIM47Q96LD4 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
TRIM47Q96LD4 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC8.15□□□□□ -1.1
TRIM47Q96LD4 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
TRIM47Q96LD4 AC114755.4-201ENST00000439114 443 ntBASIC8.15□□□□□ -1.1
TRIM47Q96LD4 MTND3P1-201ENST00000441336 220 ntBASIC8.15□□□□□ -1.1
TRIM47Q96LD4 TXNP2-201ENST00000443918 295 ntBASIC8.15□□□□□ -1.1
TRIM47Q96LD4 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC8.15□□□□□ -1.1
TRIM47Q96LD4 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
TRIM47Q96LD4 AL121578.2-201ENST00000448797 447 ntBASIC8.15□□□□□ -1.1
TRIM47Q96LD4 RPL7AP71-201ENST00000451120 739 ntBASIC8.15□□□□□ -1.1
TRIM47Q96LD4 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC8.15□□□□□ -1.1
TRIM47Q96LD4 AC023245.1-201ENST00000468501 517 ntBASIC8.15□□□□□ -1.1
TRIM47Q96LD4 AC008410.1-201ENST00000483777 339 ntBASIC8.15□□□□□ -1.1
TRIM47Q96LD4 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
TRIM47Q96LD4 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC8.15□□□□□ -1.1
TRIM47Q96LD4 AC011853.1-201ENST00000518911 454 ntBASIC8.15□□□□□ -1.1
TRIM47Q96LD4 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC8.15□□□□□ -1.1
TRIM47Q96LD4 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC8.15□□□□□ -1.1
TRIM47Q96LD4 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC8.15□□□□□ -1.1
TRIM47Q96LD4 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC8.15□□□□□ -1.1
TRIM47Q96LD4 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC8.15□□□□□ -1.1
TRIM47Q96LD4 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC8.15□□□□□ -1.1
TRIM47Q96LD4 RPS11-205ENST00000599561 430 ntTSL 5 BASIC8.15□□□□□ -1.1
TRIM47Q96LD4 AC007621.1-201ENST00000604544 437 ntBASIC8.15□□□□□ -1.1
TRIM47Q96LD4 AC018714.1-201ENST00000605028 208 ntBASIC8.15□□□□□ -1.1
TRIM47Q96LD4 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC8.15□□□□□ -1.1
TRIM47Q96LD4 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC8.15□□□□□ -1.1
TRIM47Q96LD4 AC073592.6-201ENST00000624271 415 ntBASIC8.15□□□□□ -1.1
TRIM47Q96LD4 TTK-211ENST00000627129 240 ntTSL 5 BASIC8.15□□□□□ -1.1
TRIM47Q96LD4 PCMTD1P7-201ENST00000634506 357 ntBASIC8.15□□□□□ -1.1
TRIM47Q96LD4 AL139254.2-202ENST00000641937 1156 ntBASIC8.15□□□□□ -1.1
TRIM47Q96LD4 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.1
TRIM47Q96LD4 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC8.15□□□□□ -1.1
TRIM47Q96LD4 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
TRIM47Q96LD4 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
TRIM47Q96LD4 BX322650.1-201ENST00000332359 2143 ntBASIC8.15□□□□□ -1.11
TRIM47Q96LD4 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC8.15□□□□□ -1.11
TRIM47Q96LD4 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC8.15□□□□□ -1.11
TRIM47Q96LD4 SPATA31C1-201ENST00000420021 3895 ntBASIC8.15□□□□□ -1.11
TRIM47Q96LD4 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC8.15□□□□□ -1.11
TRIM47Q96LD4 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
TRIM47Q96LD4 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC8.15□□□□□ -1.11
TRIM47Q96LD4 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC8.15□□□□□ -1.11
TRIM47Q96LD4 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
TRIM47Q96LD4 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC8.15□□□□□ -1.11
TRIM47Q96LD4 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TRIM47Q96LD4 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TRIM47Q96LD4 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TRIM47Q96LD4 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC8.14□□□□□ -1.11
TRIM47Q96LD4 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TRIM47Q96LD4 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TRIM47Q96LD4 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TRIM47Q96LD4 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
TRIM47Q96LD4 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC8.14□□□□□ -1.11
TRIM47Q96LD4 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC8.14□□□□□ -1.11
TRIM47Q96LD4 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
TRIM47Q96LD4 AC017007.4-201ENST00000503353 1352 ntBASIC8.14□□□□□ -1.11
TRIM47Q96LD4 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC8.14□□□□□ -1.11
TRIM47Q96LD4 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TRIM47Q96LD4 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
TRIM47Q96LD4 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
TRIM47Q96LD4 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC8.14□□□□□ -1.11
TRIM47Q96LD4 AC244452.1-201ENST00000413798 141 ntBASIC8.14□□□□□ -1.11
TRIM47Q96LD4 RPL35AP24-201ENST00000413846 330 ntBASIC8.14□□□□□ -1.11
TRIM47Q96LD4 OFD1P2Y-201ENST00000421895 1149 ntBASIC8.14□□□□□ -1.11
TRIM47Q96LD4 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC8.14□□□□□ -1.11
TRIM47Q96LD4 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC8.14□□□□□ -1.11
TRIM47Q96LD4 HSD52-202ENST00000436225 772 ntTSL 3 BASIC8.14□□□□□ -1.11
TRIM47Q96LD4 AC234771.2-201ENST00000445718 597 ntBASIC8.14□□□□□ -1.11
TRIM47Q96LD4 AC093166.3-201ENST00000448785 303 ntBASIC8.14□□□□□ -1.11
TRIM47Q96LD4 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC8.14□□□□□ -1.11
TRIM47Q96LD4 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC8.14□□□□□ -1.11
TRIM47Q96LD4 AC040975.1-201ENST00000472104 316 ntBASIC8.14□□□□□ -1.11
TRIM47Q96LD4 NCOR1P1-202ENST00000486162 291 ntBASIC8.14□□□□□ -1.11
TRIM47Q96LD4 AC021087.2-201ENST00000504656 1203 ntBASIC8.14□□□□□ -1.11
TRIM47Q96LD4 AC055733.3-201ENST00000505214 523 ntBASIC8.14□□□□□ -1.11
TRIM47Q96LD4 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
TRIM47Q96LD4 HNRNPKP5-201ENST00000515300 253 ntBASIC8.14□□□□□ -1.11
TRIM47Q96LD4 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC8.14□□□□□ -1.11
TRIM47Q96LD4 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC8.14□□□□□ -1.11
TRIM47Q96LD4 MIR4789-201ENST00000577469 82 ntBASIC8.14□□□□□ -1.11
TRIM47Q96LD4 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC8.14□□□□□ -1.11
TRIM47Q96LD4 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC8.14□□□□□ -1.11
TRIM47Q96LD4 AL135999.3-201ENST00000610501 812 ntBASIC8.14□□□□□ -1.11
TRIM47Q96LD4 AC073348.1-201ENST00000623002 331 ntBASIC8.14□□□□□ -1.11
TRIM47Q96LD4 TEX41-256ENST00000626411 368 ntTSL 5 BASIC8.14□□□□□ -1.11
TRIM47Q96LD4 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC8.14□□□□□ -1.11
TRIM47Q96LD4 AC027559.1-201ENST00000636288 271 ntBASIC8.14□□□□□ -1.11
TRIM47Q96LD4 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TRIM47Q96LD4 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
TRIM47Q96LD4 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC8.14□□□□□ -1.11
TRIM47Q96LD4 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms