Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 RNGTTP1-201ENST00000420965 728 ntBASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 RPL23AP23-201ENST00000452590 471 ntBASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 AC008410.1-201ENST00000483777 339 ntBASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 RPL32P33-201ENST00000487023 394 ntBASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 DUTP1-201ENST00000493631 470 ntBASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 AC112518.2-201ENST00000508565 425 ntBASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 AC093815.1-201ENST00000508637 280 ntBASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 AC139365.2-201ENST00000517972 253 ntBASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 AC126615.2-201ENST00000553003 515 ntBASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 AC004241.3-201ENST00000611728 517 ntBASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 AL096712.1-201ENST00000614561 159 ntBASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.45□□□□□ -1.38
CDK5RAP3Q96JB5 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 AC023490.2-201ENST00000359859 470 ntBASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 AC245060.4-201ENST00000413293 1121 ntBASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 AL158827.1-201ENST00000416300 391 ntBASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 AL606495.1-201ENST00000422100 813 ntBASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 AC092106.1-201ENST00000444291 373 ntBASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 HMGN1P2-201ENST00000445197 310 ntBASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 AP006222.1-205ENST00000450734 457 ntBASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 RN7SL570P-201ENST00000484405 292 ntBASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 NENFP3-201ENST00000503735 313 ntBASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 RNU5A-7P-201ENST00000515979 116 ntBASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 RNA5SP271-201ENST00000516700 88 ntBASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 SNORA70.20-201ENST00000516848 126 ntBASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 AC020937.1-201ENST00000519677 1013 ntBASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 AC096996.1-201ENST00000563813 325 ntBASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 AC129915.3-201ENST00000634128 948 ntBASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 OR8A1-204ENST00000642111 1145 ntBASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CDK5RAP3Q96JB5 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 AC107021.2-201ENST00000567714 2095 ntBASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 LINC02019-201ENST00000608605 2060 ntBASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CDK5RAP3Q96JB5 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms