Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 EEF1B2P6-201ENST00000445713 673 ntBASIC5.34□□□□□ -1.55
PDLIM5Q96HC4 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.34□□□□□ -1.55
PDLIM5Q96HC4 VN1R48P-201ENST00000448149 1036 ntBASIC5.34□□□□□ -1.55
PDLIM5Q96HC4 AL672138.1-201ENST00000450604 1015 ntBASIC5.34□□□□□ -1.55
PDLIM5Q96HC4 RPS27AP2-201ENST00000457576 465 ntBASIC5.34□□□□□ -1.55
PDLIM5Q96HC4 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.34□□□□□ -1.55
PDLIM5Q96HC4 RN7SL72P-201ENST00000460697 269 ntBASIC5.34□□□□□ -1.55
PDLIM5Q96HC4 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.34□□□□□ -1.55
PDLIM5Q96HC4 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
PDLIM5Q96HC4 HMGB1P44-201ENST00000508597 572 ntBASIC5.34□□□□□ -1.55
PDLIM5Q96HC4 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.34□□□□□ -1.55
PDLIM5Q96HC4 AC074087.1-201ENST00000512059 724 ntBASIC5.34□□□□□ -1.55
PDLIM5Q96HC4 MTND6P2-201ENST00000512226 524 ntBASIC5.34□□□□□ -1.55
PDLIM5Q96HC4 RNA5SP230-201ENST00000517039 122 ntBASIC5.34□□□□□ -1.55
PDLIM5Q96HC4 MTND2P7-201ENST00000521337 640 ntBASIC5.34□□□□□ -1.55
PDLIM5Q96HC4 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.34□□□□□ -1.55
PDLIM5Q96HC4 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.34□□□□□ -1.55
PDLIM5Q96HC4 AP002373.2-201ENST00000541631 1060 ntBASIC5.34□□□□□ -1.55
PDLIM5Q96HC4 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.34□□□□□ -1.55
PDLIM5Q96HC4 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.34□□□□□ -1.55
PDLIM5Q96HC4 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.34□□□□□ -1.55
PDLIM5Q96HC4 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.34□□□□□ -1.55
PDLIM5Q96HC4 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.34□□□□□ -1.55
PDLIM5Q96HC4 RN7SL356P-201ENST00000582228 248 ntBASIC5.34□□□□□ -1.55
PDLIM5Q96HC4 MIR4505-201ENST00000582238 73 ntBASIC5.34□□□□□ -1.55
PDLIM5Q96HC4 AC108738.1-201ENST00000603703 237 ntBASIC5.34□□□□□ -1.55
PDLIM5Q96HC4 AC084036.1-201ENST00000609190 508 ntBASIC5.34□□□□□ -1.55
PDLIM5Q96HC4 AC244107.2-201ENST00000611773 76 ntBASIC5.34□□□□□ -1.55
PDLIM5Q96HC4 AC109583.2-201ENST00000617367 129 ntBASIC5.34□□□□□ -1.55
PDLIM5Q96HC4 AC132068.1-201ENST00000623805 459 ntBASIC5.34□□□□□ -1.55
PDLIM5Q96HC4 AP003400.3-201ENST00000624904 346 ntBASIC5.34□□□□□ -1.55
PDLIM5Q96HC4 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.34□□□□□ -1.55
PDLIM5Q96HC4 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.34□□□□□ -1.55
PDLIM5Q96HC4 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.34□□□□□ -1.55
PDLIM5Q96HC4 OR8A1-204ENST00000642111 1145 ntBASIC5.34□□□□□ -1.55
PDLIM5Q96HC4 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
PDLIM5Q96HC4 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
PDLIM5Q96HC4 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
PDLIM5Q96HC4 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.34□□□□□ -1.56
PDLIM5Q96HC4 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 DHFRP5-201ENST00000406944 564 ntBASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 BTF3P9-201ENST00000418784 283 ntBASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 MTND6P12-201ENST00000428247 522 ntBASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 AC046176.1-201ENST00000435260 1170 ntBASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 AC093716.1-201ENST00000435923 377 ntBASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 IGBP1P4-201ENST00000503202 879 ntBASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 AC109481.1-201ENST00000509173 282 ntBASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 AC022360.1-201ENST00000521058 340 ntBASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 OR8G3P-201ENST00000533406 921 ntBASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 AL359219.2-201ENST00000555184 348 ntBASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 SULT1C2P2-201ENST00000562517 294 ntBASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 AC015720.2-201ENST00000567709 334 ntBASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 AC010266.2-201ENST00000564741 3255 ntBASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 SAMMSON-213ENST00000641336 1521 ntBASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PDLIM5Q96HC4 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 AC006484.1-201ENST00000435086 1884 ntBASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 TRIM51GP-201ENST00000534741 1350 ntBASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 MIR621-201ENST00000384919 96 ntBASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms