Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.36□□□□□ -1.55
VPS33AQ96AX1 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.36□□□□□ -1.55
VPS33AQ96AX1 TCP1P3-201ENST00000414406 1498 ntBASIC5.36□□□□□ -1.55
VPS33AQ96AX1 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
VPS33AQ96AX1 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS33AQ96AX1 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.36□□□□□ -1.55
VPS33AQ96AX1 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
VPS33AQ96AX1 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
VPS33AQ96AX1 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
VPS33AQ96AX1 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
VPS33AQ96AX1 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
VPS33AQ96AX1 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS33AQ96AX1 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS33AQ96AX1 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.35□□□□□ -1.55
VPS33AQ96AX1 AC104260.2-201ENST00000623551 3497 ntBASIC5.35□□□□□ -1.55
VPS33AQ96AX1 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
VPS33AQ96AX1 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS33AQ96AX1 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS33AQ96AX1 AL359715.3-201ENST00000569267 2123 ntBASIC5.35□□□□□ -1.55
VPS33AQ96AX1 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS33AQ96AX1 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS33AQ96AX1 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VPS33AQ96AX1 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VPS33AQ96AX1 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS33AQ96AX1 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VPS33AQ96AX1 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS33AQ96AX1 TRIM51GP-201ENST00000534741 1350 ntBASIC5.35□□□□□ -1.55
VPS33AQ96AX1 CASC19-248ENST00000641674 1356 ntBASIC5.35□□□□□ -1.55
VPS33AQ96AX1 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.35□□□□□ -1.55
VPS33AQ96AX1 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VPS33AQ96AX1 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS33AQ96AX1 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
VPS33AQ96AX1 GAPDHP24-201ENST00000328713 983 ntBASIC5.35□□□□□ -1.55
VPS33AQ96AX1 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS33AQ96AX1 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.35□□□□□ -1.55
VPS33AQ96AX1 Z86062.1-201ENST00000406773 777 ntBASIC5.35□□□□□ -1.55
VPS33AQ96AX1 RPSAP35-201ENST00000413753 818 ntBASIC5.35□□□□□ -1.55
VPS33AQ96AX1 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VPS33AQ96AX1 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.35□□□□□ -1.55
VPS33AQ96AX1 AC073465.2-201ENST00000440938 498 ntBASIC5.35□□□□□ -1.55
VPS33AQ96AX1 TAAR4P-201ENST00000454843 1039 ntBASIC5.35□□□□□ -1.55
VPS33AQ96AX1 CST12P-201ENST00000457644 362 ntBASIC5.35□□□□□ -1.55
VPS33AQ96AX1 RN7SL193P-201ENST00000491708 276 ntBASIC5.35□□□□□ -1.55
VPS33AQ96AX1 AC009120.1-201ENST00000493458 473 ntBASIC5.35□□□□□ -1.55
VPS33AQ96AX1 DUTP7-201ENST00000507982 486 ntBASIC5.35□□□□□ -1.55
VPS33AQ96AX1 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS33AQ96AX1 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS33AQ96AX1 AC021678.3-201ENST00000517893 476 ntBASIC5.35□□□□□ -1.55
VPS33AQ96AX1 HMGB1P46-201ENST00000520062 610 ntBASIC5.35□□□□□ -1.55
VPS33AQ96AX1 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.35□□□□□ -1.55
VPS33AQ96AX1 PMS2P3-207ENST00000529061 717 ntBASIC5.35□□□□□ -1.55
VPS33AQ96AX1 OR5AM1P-201ENST00000532136 1032 ntBASIC5.35□□□□□ -1.55
VPS33AQ96AX1 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.35□□□□□ -1.55
VPS33AQ96AX1 HSPE1P2-201ENST00000554777 306 ntBASIC5.35□□□□□ -1.55
VPS33AQ96AX1 AL356801.1-201ENST00000559320 294 ntBASIC5.35□□□□□ -1.55
VPS33AQ96AX1 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS33AQ96AX1 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.35□□□□□ -1.55
VPS33AQ96AX1 MIR4502-201ENST00000580432 81 ntBASIC5.35□□□□□ -1.55
VPS33AQ96AX1 MIR4260-201ENST00000583107 67 ntBASIC5.35□□□□□ -1.55
VPS33AQ96AX1 MIR6793-201ENST00000612376 63 ntBASIC5.35□□□□□ -1.55
VPS33AQ96AX1 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.35□□□□□ -1.55
VPS33AQ96AX1 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.35□□□□□ -1.55
VPS33AQ96AX1 AC090607.5-201ENST00000615692 224 ntBASIC5.35□□□□□ -1.55
VPS33AQ96AX1 MIR6813-201ENST00000621638 56 ntBASIC5.35□□□□□ -1.55
VPS33AQ96AX1 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
VPS33AQ96AX1 AC119674.1-212ENST00000641155 993 ntBASIC5.35□□□□□ -1.55
VPS33AQ96AX1 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS33AQ96AX1 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
VPS33AQ96AX1 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VPS33AQ96AX1 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
VPS33AQ96AX1 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS33AQ96AX1 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS33AQ96AX1 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VPS33AQ96AX1 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
VPS33AQ96AX1 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VPS33AQ96AX1 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.34□□□□□ -1.55
VPS33AQ96AX1 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS33AQ96AX1 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS33AQ96AX1 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VPS33AQ96AX1 AC093225.1-201ENST00000506867 1408 ntBASIC5.34□□□□□ -1.55
VPS33AQ96AX1 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.34□□□□□ -1.55
VPS33AQ96AX1 STX3-208ENST00000641815 3236 ntBASIC5.34□□□□□ -1.55
VPS33AQ96AX1 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VPS33AQ96AX1 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VPS33AQ96AX1 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS33AQ96AX1 RN7SKP171-201ENST00000364417 303 ntBASIC5.34□□□□□ -1.55
VPS33AQ96AX1 SNORD51.1-201ENST00000365405 77 ntBASIC5.34□□□□□ -1.55
VPS33AQ96AX1 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS33AQ96AX1 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS33AQ96AX1 HYALP1-201ENST00000417674 1279 ntBASIC5.34□□□□□ -1.55
VPS33AQ96AX1 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.34□□□□□ -1.55
VPS33AQ96AX1 BX284632.2-201ENST00000421091 399 ntBASIC5.34□□□□□ -1.55
VPS33AQ96AX1 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS33AQ96AX1 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.34□□□□□ -1.55
VPS33AQ96AX1 RPL7P56-201ENST00000429441 717 ntBASIC5.34□□□□□ -1.55
VPS33AQ96AX1 MTND2P21-201ENST00000436242 1042 ntBASIC5.34□□□□□ -1.55
VPS33AQ96AX1 VN1R110P-201ENST00000438988 971 ntBASIC5.34□□□□□ -1.55
VPS33AQ96AX1 AL512605.1-202ENST00000441919 381 ntBASIC5.34□□□□□ -1.55
VPS33AQ96AX1 AL359955.2-201ENST00000445380 353 ntBASIC5.34□□□□□ -1.55
VPS33AQ96AX1 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms