Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 VN1R25P-201ENST00000443385 738 ntBASIC6.66□□□□□ -1.34
ERCC4Q92889 USP9YP17-201ENST00000444617 696 ntBASIC6.66□□□□□ -1.34
ERCC4Q92889 FTLP8-201ENST00000446770 267 ntBASIC6.66□□□□□ -1.34
ERCC4Q92889 AL161722.1-201ENST00000446972 1032 ntBASIC6.66□□□□□ -1.34
ERCC4Q92889 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC6.66□□□□□ -1.34
ERCC4Q92889 AC002553.3-201ENST00000453002 341 ntBASIC6.66□□□□□ -1.34
ERCC4Q92889 FRG2FP-204ENST00000453982 852 ntBASIC6.66□□□□□ -1.34
ERCC4Q92889 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC6.66□□□□□ -1.34
ERCC4Q92889 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.66□□□□□ -1.34
ERCC4Q92889 AC104164.1-201ENST00000460282 590 ntBASIC6.66□□□□□ -1.34
ERCC4Q92889 RN7SL741P-201ENST00000482473 289 ntBASIC6.66□□□□□ -1.34
ERCC4Q92889 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC6.66□□□□□ -1.34
ERCC4Q92889 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC6.66□□□□□ -1.34
ERCC4Q92889 HPRT1P1-201ENST00000509498 657 ntBASIC6.66□□□□□ -1.34
ERCC4Q92889 MIR2117-201ENST00000516780 80 ntBASIC6.66□□□□□ -1.34
ERCC4Q92889 RN7SKP183-201ENST00000517169 324 ntBASIC6.66□□□□□ -1.34
ERCC4Q92889 AP000916.1-201ENST00000533869 835 ntBASIC6.66□□□□□ -1.34
ERCC4Q92889 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.66□□□□□ -1.34
ERCC4Q92889 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
ERCC4Q92889 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.66□□□□□ -1.34
ERCC4Q92889 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC6.66□□□□□ -1.34
ERCC4Q92889 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.66□□□□□ -1.34
ERCC4Q92889 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.66□□□□□ -1.34
ERCC4Q92889 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC6.66□□□□□ -1.34
ERCC4Q92889 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.66□□□□□ -1.34
ERCC4Q92889 AC080013.6-201ENST00000606185 215 ntBASIC6.66□□□□□ -1.34
ERCC4Q92889 AL359091.2-201ENST00000609303 556 ntBASIC6.66□□□□□ -1.34
ERCC4Q92889 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.66□□□□□ -1.34
ERCC4Q92889 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC6.66□□□□□ -1.34
ERCC4Q92889 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
ERCC4Q92889 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
ERCC4Q92889 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
ERCC4Q92889 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
ERCC4Q92889 THAP12P9-201ENST00000503971 2360 ntBASIC6.66□□□□□ -1.34
ERCC4Q92889 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
ERCC4Q92889 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.66□□□□□ -1.34
ERCC4Q92889 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
ERCC4Q92889 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.66□□□□□ -1.34
ERCC4Q92889 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
ERCC4Q92889 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
ERCC4Q92889 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.65□□□□□ -1.34
ERCC4Q92889 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
ERCC4Q92889 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
ERCC4Q92889 NAMPTP1-201ENST00000440465 2514 ntBASIC6.65□□□□□ -1.34
ERCC4Q92889 RNU1-134P-201ENST00000362935 165 ntBASIC6.65□□□□□ -1.34
ERCC4Q92889 RNA5SP211-201ENST00000365516 117 ntBASIC6.65□□□□□ -1.34
ERCC4Q92889 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.65□□□□□ -1.34
ERCC4Q92889 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.65□□□□□ -1.34
ERCC4Q92889 RNU6-906P-201ENST00000384700 70 ntBASIC6.65□□□□□ -1.34
ERCC4Q92889 MIR188-201ENST00000385034 86 ntBASIC6.65□□□□□ -1.34
ERCC4Q92889 PSMA6P1-201ENST00000400275 741 ntBASIC6.65□□□□□ -1.34
ERCC4Q92889 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.65□□□□□ -1.34
ERCC4Q92889 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.65□□□□□ -1.34
ERCC4Q92889 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC6.65□□□□□ -1.34
ERCC4Q92889 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC6.65□□□□□ -1.34
ERCC4Q92889 MTCO1P43-201ENST00000431831 488 ntBASIC6.65□□□□□ -1.34
ERCC4Q92889 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.65□□□□□ -1.34
ERCC4Q92889 MTCYBP29-201ENST00000436327 1006 ntBASIC6.65□□□□□ -1.34
ERCC4Q92889 AL663074.2-201ENST00000440621 479 ntBASIC6.65□□□□□ -1.34
ERCC4Q92889 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
ERCC4Q92889 AL157884.3-201ENST00000448273 1184 ntBASIC6.65□□□□□ -1.34
ERCC4Q92889 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.65□□□□□ -1.34
ERCC4Q92889 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
ERCC4Q92889 RPSAP37-201ENST00000470913 821 ntBASIC6.65□□□□□ -1.34
ERCC4Q92889 PFN1P6-201ENST00000476786 399 ntBASIC6.65□□□□□ -1.34
ERCC4Q92889 AC004263.1-201ENST00000479327 332 ntBASIC6.65□□□□□ -1.34
ERCC4Q92889 RPL21P47-201ENST00000483696 477 ntBASIC6.65□□□□□ -1.34
ERCC4Q92889 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.65□□□□□ -1.34
ERCC4Q92889 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.65□□□□□ -1.34
ERCC4Q92889 BUD31P1-201ENST00000521828 359 ntBASIC6.65□□□□□ -1.34
ERCC4Q92889 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC6.65□□□□□ -1.34
ERCC4Q92889 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.65□□□□□ -1.34
ERCC4Q92889 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
ERCC4Q92889 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
ERCC4Q92889 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC6.65□□□□□ -1.34
ERCC4Q92889 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.65□□□□□ -1.34
ERCC4Q92889 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.65□□□□□ -1.34
ERCC4Q92889 PCNAP1-202ENST00000595299 752 ntBASIC6.65□□□□□ -1.34
ERCC4Q92889 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.65□□□□□ -1.34
ERCC4Q92889 AC146944.4-201ENST00000602697 718 ntBASIC6.65□□□□□ -1.34
ERCC4Q92889 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
ERCC4Q92889 AL135999.3-201ENST00000610501 812 ntBASIC6.65□□□□□ -1.34
ERCC4Q92889 AC015922.4-201ENST00000612568 690 ntBASIC6.65□□□□□ -1.34
ERCC4Q92889 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC6.65□□□□□ -1.34
ERCC4Q92889 AC004232.3-201ENST00000622977 525 ntBASIC6.65□□□□□ -1.34
ERCC4Q92889 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC6.65□□□□□ -1.34
ERCC4Q92889 AC073488.6-201ENST00000632293 754 ntBASIC6.65□□□□□ -1.34
ERCC4Q92889 CASC19-274ENST00000642018 970 ntBASIC6.65□□□□□ -1.34
ERCC4Q92889 AC092451.3-201ENST00000625067 1343 ntBASIC6.65□□□□□ -1.35
ERCC4Q92889 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.65□□□□□ -1.35
ERCC4Q92889 RBMY1HP-201ENST00000382759 1389 ntBASIC6.65□□□□□ -1.35
ERCC4Q92889 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
ERCC4Q92889 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.65□□□□□ -1.35
ERCC4Q92889 AC090181.3-201ENST00000624777 1514 ntBASIC6.65□□□□□ -1.35
ERCC4Q92889 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ERCC4Q92889 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ERCC4Q92889 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
ERCC4Q92889 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.64□□□□□ -1.35
ERCC4Q92889 MFSD8-239ENST00000641590 2479 ntBASIC6.64□□□□□ -1.35
ERCC4Q92889 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms