Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC126177.5-201ENST00000549599 178 ntBASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 RPL10P14-201ENST00000565265 298 ntBASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 AL162431.4-201ENST00000604674 411 ntBASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 AC079395.2-201ENST00000610982 737 ntBASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 AL139407.1-201ENST00000613826 1175 ntBASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 AL359513.1-201ENST00000614364 557 ntBASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 AC026367.3-201ENST00000619032 590 ntBASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 MIR6839-201ENST00000620425 113 ntBASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 AL049767.1-202ENST00000637826 242 ntBASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 MUC2-202ENST00000613187 4845 ntBASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 AC112198.2-201ENST00000426589 6996 ntBASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 AC023421.1-201ENST00000590535 1785 ntBASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC65Q8IXS2 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC65Q8IXS2 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC65Q8IXS2 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
CCDC65Q8IXS2 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
CCDC65Q8IXS2 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
CCDC65Q8IXS2 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC65Q8IXS2 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
CCDC65Q8IXS2 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
CCDC65Q8IXS2 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC65Q8IXS2 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC65Q8IXS2 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC65Q8IXS2 AC005294.1-201ENST00000355509 281 ntBASIC5.87□□□□□ -1.47
CCDC65Q8IXS2 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC65Q8IXS2 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.87□□□□□ -1.47
CCDC65Q8IXS2 OR3A2-201ENST00000408891 1076 ntBASIC5.87□□□□□ -1.47
CCDC65Q8IXS2 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC65Q8IXS2 HYALP1-201ENST00000417674 1279 ntBASIC5.87□□□□□ -1.47
CCDC65Q8IXS2 HSPE1P16-201ENST00000426640 348 ntBASIC5.87□□□□□ -1.47
CCDC65Q8IXS2 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC65Q8IXS2 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC65Q8IXS2 AC108693.1-201ENST00000496068 432 ntBASIC5.87□□□□□ -1.47
CCDC65Q8IXS2 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.87□□□□□ -1.47
CCDC65Q8IXS2 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC65Q8IXS2 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC65Q8IXS2 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC65Q8IXS2 AP005262.1-201ENST00000582646 997 ntBASIC5.87□□□□□ -1.47
CCDC65Q8IXS2 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC65Q8IXS2 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC65Q8IXS2 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC65Q8IXS2 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC65Q8IXS2 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC65Q8IXS2 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC65Q8IXS2 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CCDC65Q8IXS2 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 MTCO1P15-201ENST00000529569 1526 ntBASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 RNU1-149P-201ENST00000390870 161 ntBASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 CLUHP1-201ENST00000435012 1190 ntBASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 AL391987.1-201ENST00000441025 200 ntBASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 SPRYD7P1-201ENST00000443861 570 ntBASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 NOP56P2-201ENST00000447491 769 ntBASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 OR52E3P-201ENST00000452083 936 ntBASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 AC016559.2-201ENST00000510759 359 ntBASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 RNU6-941P-201ENST00000516346 108 ntBASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 RNA5SP373-201ENST00000517271 95 ntBASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 DPRXP4-201ENST00000578053 568 ntBASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 AC011626.1-201ENST00000604710 562 ntBASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 FAM72A-208ENST00000607379 1139 ntBASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 OR55B1P-203ENST00000641518 2602 ntBASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC65Q8IXS2 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC65Q8IXS2 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC65Q8IXS2 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC65Q8IXS2 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms