Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 KARSP3-201ENST00000571212 1504 ntBASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 DCAF13P3-201ENST00000561147 1334 ntBASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
NPAS4Q8IUM7 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 AC005832.2-201ENST00000538921 1430 ntBASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 AL161912.4-201ENST00000623889 2468 ntBASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 QRSL1P1-201ENST00000400977 1540 ntBASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 Y_RNA.18-201ENST00000362461 102 ntBASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 RNU6-619P-201ENST00000365146 108 ntBASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 Y_RNA.559-201ENST00000384686 107 ntBASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 RNU6-1300P-201ENST00000391046 108 ntBASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 RNU6-920P-201ENST00000410926 92 ntBASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 MTCO3P41-201ENST00000414801 328 ntBASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 AC073069.1-201ENST00000428657 441 ntBASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 RPL31P54-201ENST00000429803 370 ntBASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 NEK4P1-201ENST00000433383 879 ntBASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 MTATP6P23-201ENST00000440153 476 ntBASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 HMGN1P2-201ENST00000445197 310 ntBASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 COX4I1P2-201ENST00000447446 547 ntBASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 AL133244.1-201ENST00000456007 258 ntBASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 SULT1D1P-201ENST00000458020 882 ntBASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 ANK3-207ENST00000460468 677 ntTSL 3 BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 ACTG1P13-201ENST00000486987 1043 ntBASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 AC104685.1-201ENST00000502445 371 ntBASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 AC018645.1-201ENST00000505003 109 ntBASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 LECT2-203ENST00000512872 762 ntTSL 5 BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 Y_RNA.695-201ENST00000516715 107 ntBASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 HMGB1P42-201ENST00000532126 553 ntBASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 AC007115.1-201ENST00000546853 234 ntBASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 AC012435.1-202ENST00000568772 240 ntBASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 AP003115.1-201ENST00000569849 463 ntBASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 RN7SL404P-201ENST00000582421 281 ntBASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 AC010327.2-201ENST00000587647 488 ntBASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 AL589863.1-201ENST00000595383 631 ntBASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 AL513477.2-201ENST00000607858 568 ntBASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 AC005962.2-201ENST00000611427 652 ntBASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 AC007204.2-201ENST00000615022 616 ntBASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 AC183089.2-201ENST00000637931 916 ntBASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 AL355488.2-201ENST00000609909 2850 ntBASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 RACGAP1P-201ENST00000550663 1879 ntBASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NPAS4Q8IUM7 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 MTND5P29-201ENST00000458676 1807 ntBASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC7.18□□□□□ -1.26
NPAS4Q8IUM7 LYARP1-201ENST00000436977 1501 ntBASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms