Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.74□□□□□ -1.65
LRRC28Q86X40 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LRRC28Q86X40 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRRC28Q86X40 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRRC28Q86X40 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LRRC28Q86X40 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.74□□□□□ -1.65
LRRC28Q86X40 AL022393.1-201ENST00000625142 1677 ntBASIC4.74□□□□□ -1.65
LRRC28Q86X40 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRRC28Q86X40 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRRC28Q86X40 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
LRRC28Q86X40 RN7SKP97-201ENST00000410966 333 ntBASIC4.74□□□□□ -1.65
LRRC28Q86X40 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.74□□□□□ -1.65
LRRC28Q86X40 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.74□□□□□ -1.65
LRRC28Q86X40 AC007161.1-204ENST00000423039 460 ntBASIC4.74□□□□□ -1.65
LRRC28Q86X40 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.74□□□□□ -1.65
LRRC28Q86X40 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.74□□□□□ -1.65
LRRC28Q86X40 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.74□□□□□ -1.65
LRRC28Q86X40 AC011411.1-201ENST00000509592 876 ntBASIC4.74□□□□□ -1.65
LRRC28Q86X40 AC022360.1-201ENST00000521058 340 ntBASIC4.74□□□□□ -1.65
LRRC28Q86X40 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LRRC28Q86X40 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LRRC28Q86X40 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.74□□□□□ -1.65
LRRC28Q86X40 RBM22P12-201ENST00000567098 1255 ntBASIC4.74□□□□□ -1.65
LRRC28Q86X40 AC022884.2-201ENST00000578535 580 ntBASIC4.74□□□□□ -1.65
LRRC28Q86X40 MIR6839-201ENST00000620425 113 ntBASIC4.74□□□□□ -1.65
LRRC28Q86X40 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
LRRC28Q86X40 AL672167.1-204ENST00000641875 3017 ntBASIC4.74□□□□□ -1.65
LRRC28Q86X40 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.74□□□□□ -1.65
LRRC28Q86X40 AC011447.7-201ENST00000624228 1590 ntBASIC4.74□□□□□ -1.65
LRRC28Q86X40 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRRC28Q86X40 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRRC28Q86X40 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRRC28Q86X40 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.73□□□□□ -1.65
LRRC28Q86X40 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.73□□□□□ -1.65
LRRC28Q86X40 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
LRRC28Q86X40 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRRC28Q86X40 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LRRC28Q86X40 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
LRRC28Q86X40 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
LRRC28Q86X40 AL391422.1-201ENST00000402155 436 ntBASIC4.73□□□□□ -1.65
LRRC28Q86X40 AL359643.1-201ENST00000404109 423 ntBASIC4.73□□□□□ -1.65
LRRC28Q86X40 AC046176.1-201ENST00000435260 1170 ntBASIC4.73□□□□□ -1.65
LRRC28Q86X40 FMO7P-201ENST00000436045 768 ntBASIC4.73□□□□□ -1.65
LRRC28Q86X40 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.73□□□□□ -1.65
LRRC28Q86X40 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
LRRC28Q86X40 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.73□□□□□ -1.65
LRRC28Q86X40 AC018638.3-201ENST00000461273 132 ntBASIC4.73□□□□□ -1.65
LRRC28Q86X40 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.73□□□□□ -1.65
LRRC28Q86X40 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LRRC28Q86X40 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.73□□□□□ -1.65
LRRC28Q86X40 MIR1273E-201ENST00000581165 102 ntBASIC4.73□□□□□ -1.65
LRRC28Q86X40 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.73□□□□□ -1.65
LRRC28Q86X40 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.73□□□□□ -1.65
LRRC28Q86X40 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.73□□□□□ -1.65
LRRC28Q86X40 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.73□□□□□ -1.65
LRRC28Q86X40 AC244107.2-201ENST00000611773 76 ntBASIC4.73□□□□□ -1.65
LRRC28Q86X40 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.73□□□□□ -1.65
LRRC28Q86X40 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC4.73□□□□□ -1.65
LRRC28Q86X40 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.73□□□□□ -1.65
LRRC28Q86X40 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.73□□□□□ -1.65
LRRC28Q86X40 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LRRC28Q86X40 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
LRRC28Q86X40 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.73□□□□□ -1.65
LRRC28Q86X40 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRRC28Q86X40 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LRRC28Q86X40 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRRC28Q86X40 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRRC28Q86X40 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
LRRC28Q86X40 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRRC28Q86X40 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRRC28Q86X40 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
LRRC28Q86X40 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.73□□□□□ -1.65
LRRC28Q86X40 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRRC28Q86X40 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRRC28Q86X40 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
LRRC28Q86X40 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRRC28Q86X40 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRRC28Q86X40 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.72□□□□□ -1.65
LRRC28Q86X40 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
LRRC28Q86X40 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
LRRC28Q86X40 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRRC28Q86X40 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LRRC28Q86X40 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRRC28Q86X40 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LRRC28Q86X40 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
LRRC28Q86X40 OR9G4-201ENST00000302957 984 ntBASIC4.72□□□□□ -1.65
LRRC28Q86X40 RN7SKP124-201ENST00000364730 341 ntBASIC4.72□□□□□ -1.65
LRRC28Q86X40 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRRC28Q86X40 AL078599.1-201ENST00000402075 293 ntBASIC4.72□□□□□ -1.65
LRRC28Q86X40 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.72□□□□□ -1.65
LRRC28Q86X40 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.72□□□□□ -1.65
LRRC28Q86X40 AC079355.1-201ENST00000421770 223 ntBASIC4.72□□□□□ -1.65
LRRC28Q86X40 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.72□□□□□ -1.65
LRRC28Q86X40 AL133173.1-201ENST00000423458 397 ntBASIC4.72□□□□□ -1.65
LRRC28Q86X40 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.72□□□□□ -1.65
LRRC28Q86X40 NPM1P22-201ENST00000427761 952 ntBASIC4.72□□□□□ -1.65
LRRC28Q86X40 AC124944.2-201ENST00000429866 1242 ntBASIC4.72□□□□□ -1.65
LRRC28Q86X40 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.72□□□□□ -1.65
LRRC28Q86X40 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC4.72□□□□□ -1.65
LRRC28Q86X40 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms