Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 MTATP6P1-201ENST00000514057 681 ntBASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 snoU109.5-201ENST00000516231 132 ntBASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 CYCSP22-201ENST00000517555 339 ntBASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 SOX5P1-201ENST00000524155 1127 ntBASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 AC068339.2-201ENST00000534395 618 ntBASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 AC125612.1-201ENST00000547580 377 ntBASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 AL163952.1-202ENST00000569625 600 ntBASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 AC006115.2-201ENST00000596823 202 ntBASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 AL359513.1-201ENST00000614364 557 ntBASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 AL445528.2-201ENST00000620582 470 ntBASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 AC125336.1-201ENST00000508893 2827 ntBASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 RNA5SP435-201ENST00000364044 108 ntBASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 RN7SKP78-201ENST00000364711 318 ntBASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 RNU6-452P-201ENST00000384406 107 ntBASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 SNORA17A-201ENST00000391185 133 ntBASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 HMGB1P20-201ENST00000402555 677 ntBASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 RPL34P3-201ENST00000421454 338 ntBASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 PNRC2P1-201ENST00000423940 420 ntBASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 AC104843.2-201ENST00000427666 297 ntBASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 AC092685.1-201ENST00000447960 1243 ntBASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 OR7E116P-201ENST00000448529 957 ntBASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 SETP20-201ENST00000457046 852 ntBASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 RPL32P33-201ENST00000487023 394 ntBASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 RPL7P51-201ENST00000490532 749 ntBASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 AC105384.2-201ENST00000508433 640 ntBASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 AC093815.1-201ENST00000508637 280 ntBASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 AC074255.1-201ENST00000511259 501 ntBASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 AC139365.2-201ENST00000517972 253 ntBASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 AC112191.2-201ENST00000522428 333 ntBASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 C1DP5-201ENST00000525775 383 ntBASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 ABI1P1-201ENST00000603375 1120 ntBASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 AP003497.2-201ENST00000624220 967 ntBASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 SNORA17.5-201ENST00000630429 132 ntBASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 AC103703.1-201ENST00000634783 663 ntBASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 AC239868.2-201ENST00000564237 4527 ntBASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 AC092451.3-201ENST00000625067 1343 ntBASIC5.68□□□□□ -1.5
LRRTM4Q86VH4 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LRRTM4Q86VH4 AC092070.2-203ENST00000598377 3644 ntBASIC5.67□□□□□ -1.5
LRRTM4Q86VH4 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LRRTM4Q86VH4 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
LRRTM4Q86VH4 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LRRTM4Q86VH4 LINC02019-201ENST00000608605 2060 ntBASIC5.67□□□□□ -1.5
LRRTM4Q86VH4 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LRRTM4Q86VH4 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LRRTM4Q86VH4 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms