Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
SNAPC4Q5SXM2 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC8.36□□□□□ -1.07
SNAPC4Q5SXM2 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC8.36□□□□□ -1.07
SNAPC4Q5SXM2 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SNAPC4Q5SXM2 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SNAPC4Q5SXM2 IGKV7-3-201ENST00000357453 298 ntBASIC8.36□□□□□ -1.07
SNAPC4Q5SXM2 RNA5SP447-201ENST00000363749 119 ntBASIC8.36□□□□□ -1.07
SNAPC4Q5SXM2 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
SNAPC4Q5SXM2 MIR134-201ENST00000385258 73 ntBASIC8.36□□□□□ -1.07
SNAPC4Q5SXM2 DNAJA1P3-201ENST00000399417 1194 ntBASIC8.36□□□□□ -1.07
SNAPC4Q5SXM2 MIR298-201ENST00000401212 88 ntBASIC8.36□□□□□ -1.07
SNAPC4Q5SXM2 SNORA77-201ENST00000408716 125 ntBASIC8.36□□□□□ -1.07
SNAPC4Q5SXM2 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC8.36□□□□□ -1.07
SNAPC4Q5SXM2 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC8.36□□□□□ -1.07
SNAPC4Q5SXM2 RN7SL244P-201ENST00000493405 297 ntBASIC8.36□□□□□ -1.07
SNAPC4Q5SXM2 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC8.36□□□□□ -1.07
SNAPC4Q5SXM2 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SNAPC4Q5SXM2 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC8.36□□□□□ -1.07
SNAPC4Q5SXM2 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC8.36□□□□□ -1.07
SNAPC4Q5SXM2 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SNAPC4Q5SXM2 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC8.36□□□□□ -1.07
SNAPC4Q5SXM2 STK3-216ENST00000523601 3107 ntTSL 2 BASIC8.36□□□□□ -1.07
SNAPC4Q5SXM2 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SNAPC4Q5SXM2 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SNAPC4Q5SXM2 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SNAPC4Q5SXM2 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
SNAPC4Q5SXM2 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SNAPC4Q5SXM2 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
SNAPC4Q5SXM2 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SNAPC4Q5SXM2 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC8.35□□□□□ -1.07
SNAPC4Q5SXM2 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SNAPC4Q5SXM2 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SNAPC4Q5SXM2 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SNAPC4Q5SXM2 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
SNAPC4Q5SXM2 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC8.35□□□□□ -1.07
SNAPC4Q5SXM2 AL592148.3-201ENST00000608771 2646 ntBASIC8.35□□□□□ -1.07
SNAPC4Q5SXM2 RNU1-74P-201ENST00000384108 171 ntBASIC8.35□□□□□ -1.07
SNAPC4Q5SXM2 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC8.35□□□□□ -1.07
SNAPC4Q5SXM2 AL136455.1-201ENST00000441083 1240 ntBASIC8.35□□□□□ -1.07
SNAPC4Q5SXM2 NOP56P2-201ENST00000447491 769 ntBASIC8.35□□□□□ -1.07
SNAPC4Q5SXM2 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC8.35□□□□□ -1.07
SNAPC4Q5SXM2 RNA5SP392-201ENST00000516905 112 ntBASIC8.35□□□□□ -1.07
SNAPC4Q5SXM2 RPL12P25-202ENST00000598100 674 ntBASIC8.35□□□□□ -1.07
SNAPC4Q5SXM2 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC8.35□□□□□ -1.07
SNAPC4Q5SXM2 NEK3-211ENST00000629912 141 ntTSL 5 BASIC8.35□□□□□ -1.07
SNAPC4Q5SXM2 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC8.35□□□□□ -1.07
SNAPC4Q5SXM2 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
SNAPC4Q5SXM2 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SNAPC4Q5SXM2 MFSD8-220ENST00000641243 1422 ntBASIC8.35□□□□□ -1.07
SNAPC4Q5SXM2 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC8.34□□□□□ -1.07
SNAPC4Q5SXM2 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SNAPC4Q5SXM2 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SNAPC4Q5SXM2 PPIAP9-201ENST00000403866 498 ntBASIC8.34□□□□□ -1.07
SNAPC4Q5SXM2 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC8.34□□□□□ -1.07
SNAPC4Q5SXM2 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC8.34□□□□□ -1.07
SNAPC4Q5SXM2 AC020779.1-201ENST00000478757 796 ntBASIC8.34□□□□□ -1.07
SNAPC4Q5SXM2 AC138701.1-201ENST00000524329 714 ntBASIC8.34□□□□□ -1.07
SNAPC4Q5SXM2 AP003080.1-202ENST00000526526 915 ntBASIC8.34□□□□□ -1.07
SNAPC4Q5SXM2 AL356218.2-201ENST00000605264 187 ntBASIC8.34□□□□□ -1.07
SNAPC4Q5SXM2 MIR92B-201ENST00000607575 96 ntBASIC8.34□□□□□ -1.07
SNAPC4Q5SXM2 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC8.34□□□□□ -1.07
SNAPC4Q5SXM2 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SNAPC4Q5SXM2 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
SNAPC4Q5SXM2 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SNAPC4Q5SXM2 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SNAPC4Q5SXM2 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC8.34□□□□□ -1.07
SNAPC4Q5SXM2 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.08
SNAPC4Q5SXM2 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SNAPC4Q5SXM2 ZNF652P1-201ENST00000442420 1309 ntBASIC8.33□□□□□ -1.08
SNAPC4Q5SXM2 DMD-222ENST00000474231 5209 ntTSL 5 BASIC8.33□□□□□ -1.08
SNAPC4Q5SXM2 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
SNAPC4Q5SXM2 U3.10-201ENST00000364459 214 ntBASIC8.33□□□□□ -1.08
SNAPC4Q5SXM2 AL021331.1-201ENST00000402817 582 ntBASIC8.33□□□□□ -1.08
SNAPC4Q5SXM2 MRPS21P2-201ENST00000424704 264 ntBASIC8.33□□□□□ -1.08
SNAPC4Q5SXM2 AC044797.1-201ENST00000445744 679 ntBASIC8.33□□□□□ -1.08
SNAPC4Q5SXM2 AC133555.2-201ENST00000550213 292 ntBASIC8.33□□□□□ -1.08
SNAPC4Q5SXM2 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SNAPC4Q5SXM2 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC8.33□□□□□ -1.08
SNAPC4Q5SXM2 AL138960.1-201ENST00000613838 513 ntBASIC8.33□□□□□ -1.08
SNAPC4Q5SXM2 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC8.33□□□□□ -1.08
SNAPC4Q5SXM2 AC069542.2-201ENST00000624816 216 ntBASIC8.33□□□□□ -1.08
SNAPC4Q5SXM2 MTCO1P15-201ENST00000529569 1526 ntBASIC8.33□□□□□ -1.08
SNAPC4Q5SXM2 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
SNAPC4Q5SXM2 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SNAPC4Q5SXM2 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC8.33□□□□□ -1.08
SNAPC4Q5SXM2 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SNAPC4Q5SXM2 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC8.33□□□□□ -1.08
SNAPC4Q5SXM2 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC8.33□□□□□ -1.08
SNAPC4Q5SXM2 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
SNAPC4Q5SXM2 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
SNAPC4Q5SXM2 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 OR8V1P-201ENST00000395193 873 ntBASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 RNU6ATAC34P-201ENST00000408879 121 ntBASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 RN7SKP263-201ENST00000411194 309 ntBASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 NRBF2P3-201ENST00000432731 865 ntBASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 BX679664.2-201ENST00000439282 283 ntBASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 CDC27P1-201ENST00000445384 715 ntBASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms