Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 AC006518.2-201ENST00000542513 940 ntBASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 MIR3189-201ENST00000578735 73 ntBASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 AC093424.1-201ENST00000604999 338 ntBASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 AC022106.1-201ENST00000612834 766 ntBASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 AC245014.3-201ENST00000618589 347 ntBASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 AC024595.1-201ENST00000623088 387 ntBASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 AC006963.1-201ENST00000624003 1052 ntBASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 AL132640.3-201ENST00000630473 177 ntBASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 NSF-206ENST00000575068 2667 ntTSL 2 BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC144BQ3MJ40 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 GNG5P2-201ENST00000372054 207 ntBASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 RNU6-549P-201ENST00000384433 107 ntBASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 RN7SKP199-201ENST00000410325 305 ntBASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 AC246680.2-201ENST00000422106 389 ntBASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 AC021876.1-201ENST00000425959 359 ntBASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 GTF2IP3-201ENST00000433887 494 ntBASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 PPIAP10-201ENST00000438675 458 ntBASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 OR10R1P-201ENST00000441524 1141 ntBASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 ACA64.1-201ENST00000459171 127 ntBASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 AL355032.1-201ENST00000472981 438 ntBASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 AC090958.1-201ENST00000511122 351 ntBASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 AC093752.1-206ENST00000511823 336 ntBASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 RPA2P1-201ENST00000556557 721 ntBASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 AL583832.1-201ENST00000603227 784 ntBASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 AL365400.2-201ENST00000605604 902 ntBASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 AC024060.1-201ENST00000607052 494 ntBASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 AL591167.1-201ENST00000607321 456 ntBASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 AL008723.3-201ENST00000608926 449 ntBASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 AC087683.2-201ENST00000611384 326 ntBASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 MIR7159-201ENST00000620587 66 ntBASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 AC127024.6-201ENST00000621598 424 ntBASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 AP000676.4-201ENST00000624659 623 ntBASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 OXSM-209ENST00000626005 309 ntTSL 3 BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 AC073488.3-201ENST00000631611 778 ntBASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 AC099786.3-201ENST00000565735 1410 ntBASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 AC015799.1-201ENST00000622996 3122 ntBASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 AC007342.5-201ENST00000571340 2142 ntBASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 AC087516.1-201ENST00000561236 2428 ntBASIC7.06□□□□□ -1.28
CCDC144BQ3MJ40 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 AC022164.1-201ENST00000568767 2673 ntBASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 AL161912.4-201ENST00000623889 2468 ntBASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
CCDC144BQ3MJ40 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 244.8 ms