Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 AC026367.3-201ENST00000619032 590 ntBASIC4.73□□□□□ -1.65
FOXF1Q12946 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.73□□□□□ -1.65
FOXF1Q12946 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC4.73□□□□□ -1.65
FOXF1Q12946 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
FOXF1Q12946 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
FOXF1Q12946 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
FOXF1Q12946 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.73□□□□□ -1.65
FOXF1Q12946 AL450345.1-202ENST00000605741 3881 ntBASIC4.72□□□□□ -1.65
FOXF1Q12946 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
FOXF1Q12946 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
FOXF1Q12946 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
FOXF1Q12946 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
FOXF1Q12946 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
FOXF1Q12946 AL603750.1-201ENST00000624216 1717 ntBASIC4.72□□□□□ -1.65
FOXF1Q12946 AL034549.2-201ENST00000618285 3373 ntBASIC4.72□□□□□ -1.65
FOXF1Q12946 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
FOXF1Q12946 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
FOXF1Q12946 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
FOXF1Q12946 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
FOXF1Q12946 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
FOXF1Q12946 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
FOXF1Q12946 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
FOXF1Q12946 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.72□□□□□ -1.65
FOXF1Q12946 RNA5SP90-201ENST00000364801 99 ntBASIC4.72□□□□□ -1.65
FOXF1Q12946 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
FOXF1Q12946 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
FOXF1Q12946 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
FOXF1Q12946 RN7SKP126-201ENST00000411143 300 ntBASIC4.72□□□□□ -1.65
FOXF1Q12946 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
FOXF1Q12946 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.72□□□□□ -1.65
FOXF1Q12946 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.72□□□□□ -1.65
FOXF1Q12946 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.72□□□□□ -1.65
FOXF1Q12946 CNOT7P2-201ENST00000441051 832 ntBASIC4.72□□□□□ -1.65
FOXF1Q12946 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.72□□□□□ -1.65
FOXF1Q12946 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.72□□□□□ -1.65
FOXF1Q12946 CBX1P2-201ENST00000453841 458 ntBASIC4.72□□□□□ -1.65
FOXF1Q12946 AC009127.1-201ENST00000467090 155 ntBASIC4.72□□□□□ -1.65
FOXF1Q12946 AC072052.1-201ENST00000496556 306 ntBASIC4.72□□□□□ -1.65
FOXF1Q12946 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
FOXF1Q12946 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.72□□□□□ -1.65
FOXF1Q12946 NPM1P21-201ENST00000513394 762 ntBASIC4.72□□□□□ -1.65
FOXF1Q12946 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.72□□□□□ -1.65
FOXF1Q12946 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.72□□□□□ -1.65
FOXF1Q12946 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.72□□□□□ -1.65
FOXF1Q12946 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.72□□□□□ -1.65
FOXF1Q12946 AC090022.1-201ENST00000546569 311 ntBASIC4.72□□□□□ -1.65
FOXF1Q12946 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.72□□□□□ -1.65
FOXF1Q12946 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
FOXF1Q12946 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
FOXF1Q12946 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.72□□□□□ -1.65
FOXF1Q12946 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.72□□□□□ -1.65
FOXF1Q12946 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.72□□□□□ -1.65
FOXF1Q12946 OR51C1P-201ENST00000608504 942 ntBASIC4.72□□□□□ -1.65
FOXF1Q12946 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.72□□□□□ -1.65
FOXF1Q12946 AC008833.1-201ENST00000611633 691 ntBASIC4.72□□□□□ -1.65
FOXF1Q12946 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
FOXF1Q12946 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.72□□□□□ -1.65
FOXF1Q12946 AC118658.2-201ENST00000618697 459 ntBASIC4.72□□□□□ -1.65
FOXF1Q12946 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.72□□□□□ -1.65
FOXF1Q12946 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
FOXF1Q12946 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.72□□□□□ -1.65
FOXF1Q12946 AC006210.2-201ENST00000367074 1545 ntBASIC4.72□□□□□ -1.65
FOXF1Q12946 CIR1P2-201ENST00000514821 1342 ntBASIC4.72□□□□□ -1.65
FOXF1Q12946 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.65
FOXF1Q12946 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
FOXF1Q12946 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.65
FOXF1Q12946 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.71□□□□□ -1.65
FOXF1Q12946 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
FOXF1Q12946 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
FOXF1Q12946 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.71□□□□□ -1.66
FOXF1Q12946 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
FOXF1Q12946 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
FOXF1Q12946 SNORA17.1-201ENST00000362945 126 ntBASIC4.71□□□□□ -1.66
FOXF1Q12946 RNU1-74P-201ENST00000384108 171 ntBASIC4.71□□□□□ -1.66
FOXF1Q12946 MIR600-201ENST00000385007 98 ntBASIC4.71□□□□□ -1.66
FOXF1Q12946 MIR223-201ENST00000385204 110 ntBASIC4.71□□□□□ -1.66
FOXF1Q12946 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.71□□□□□ -1.66
FOXF1Q12946 AL358178.1-201ENST00000407698 397 ntBASIC4.71□□□□□ -1.66
FOXF1Q12946 RPL12P9-201ENST00000412942 488 ntBASIC4.71□□□□□ -1.66
FOXF1Q12946 HYALP1-201ENST00000417674 1279 ntBASIC4.71□□□□□ -1.66
FOXF1Q12946 MARK2P12-201ENST00000420129 585 ntBASIC4.71□□□□□ -1.66
FOXF1Q12946 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.71□□□□□ -1.66
FOXF1Q12946 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.71□□□□□ -1.66
FOXF1Q12946 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.71□□□□□ -1.66
FOXF1Q12946 RN7SL222P-201ENST00000476452 299 ntBASIC4.71□□□□□ -1.66
FOXF1Q12946 AC079841.1-201ENST00000481228 950 ntBASIC4.71□□□□□ -1.66
FOXF1Q12946 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.71□□□□□ -1.66
FOXF1Q12946 EIF3KP3-201ENST00000514461 639 ntBASIC4.71□□□□□ -1.66
FOXF1Q12946 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.71□□□□□ -1.66
FOXF1Q12946 AC134349.2-201ENST00000535136 910 ntBASIC4.71□□□□□ -1.66
FOXF1Q12946 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.71□□□□□ -1.66
FOXF1Q12946 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.71□□□□□ -1.66
FOXF1Q12946 OR11J2P-201ENST00000555298 907 ntBASIC4.71□□□□□ -1.66
FOXF1Q12946 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.71□□□□□ -1.66
FOXF1Q12946 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.71□□□□□ -1.66
FOXF1Q12946 MTCYBP13-201ENST00000578634 1093 ntBASIC4.71□□□□□ -1.66
FOXF1Q12946 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC4.71□□□□□ -1.66
FOXF1Q12946 PRPF19P1-201ENST00000584766 898 ntBASIC4.71□□□□□ -1.66
FOXF1Q12946 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.71□□□□□ -1.66
FOXF1Q12946 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms