Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AL050305.1-201ENST00000399993 1230 ntBASIC5.04□□□□□ -1.6
HMGCS1Q01581 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.04□□□□□ -1.6
HMGCS1Q01581 OR3A2-201ENST00000408891 1076 ntBASIC5.04□□□□□ -1.6
HMGCS1Q01581 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.04□□□□□ -1.6
HMGCS1Q01581 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.04□□□□□ -1.6
HMGCS1Q01581 AC046176.1-201ENST00000435260 1170 ntBASIC5.04□□□□□ -1.6
HMGCS1Q01581 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.04□□□□□ -1.6
HMGCS1Q01581 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.04□□□□□ -1.6
HMGCS1Q01581 DNAJB5P1-201ENST00000454004 806 ntBASIC5.04□□□□□ -1.6
HMGCS1Q01581 EIF1P7-201ENST00000487533 337 ntBASIC5.04□□□□□ -1.6
HMGCS1Q01581 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.04□□□□□ -1.6
HMGCS1Q01581 RPEP1-201ENST00000504507 658 ntBASIC5.04□□□□□ -1.6
HMGCS1Q01581 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.04□□□□□ -1.6
HMGCS1Q01581 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HMGCS1Q01581 AC127024.5-201ENST00000580085 462 ntBASIC5.04□□□□□ -1.6
HMGCS1Q01581 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.04□□□□□ -1.6
HMGCS1Q01581 AC008814.1-201ENST00000603797 406 ntBASIC5.04□□□□□ -1.6
HMGCS1Q01581 MIR6729-201ENST00000618194 65 ntBASIC5.04□□□□□ -1.6
HMGCS1Q01581 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.04□□□□□ -1.6
HMGCS1Q01581 MIR8080-201ENST00000622224 89 ntBASIC5.04□□□□□ -1.6
HMGCS1Q01581 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
HMGCS1Q01581 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.04□□□□□ -1.6
HMGCS1Q01581 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.04□□□□□ -1.6
HMGCS1Q01581 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
HMGCS1Q01581 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HMGCS1Q01581 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HMGCS1Q01581 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HMGCS1Q01581 AC006210.2-201ENST00000367074 1545 ntBASIC5.03□□□□□ -1.6
HMGCS1Q01581 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HMGCS1Q01581 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HMGCS1Q01581 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HMGCS1Q01581 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
HMGCS1Q01581 AC011755.1-201ENST00000623763 2049 ntBASIC5.03□□□□□ -1.6
HMGCS1Q01581 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HMGCS1Q01581 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HMGCS1Q01581 RNU1-146P-201ENST00000364015 165 ntBASIC5.03□□□□□ -1.6
HMGCS1Q01581 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.03□□□□□ -1.6
HMGCS1Q01581 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.03□□□□□ -1.6
HMGCS1Q01581 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.03□□□□□ -1.6
HMGCS1Q01581 GAPDHP58-201ENST00000438477 1006 ntBASIC5.03□□□□□ -1.6
HMGCS1Q01581 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.03□□□□□ -1.6
HMGCS1Q01581 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.03□□□□□ -1.6
HMGCS1Q01581 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.03□□□□□ -1.6
HMGCS1Q01581 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.03□□□□□ -1.6
HMGCS1Q01581 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.03□□□□□ -1.6
HMGCS1Q01581 AC021660.1-201ENST00000465006 554 ntBASIC5.03□□□□□ -1.6
HMGCS1Q01581 RN7SL184P-201ENST00000488308 297 ntBASIC5.03□□□□□ -1.6
HMGCS1Q01581 AC138832.1-201ENST00000522871 556 ntBASIC5.03□□□□□ -1.6
HMGCS1Q01581 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.03□□□□□ -1.6
HMGCS1Q01581 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.03□□□□□ -1.6
HMGCS1Q01581 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
HMGCS1Q01581 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HMGCS1Q01581 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.03□□□□□ -1.6
HMGCS1Q01581 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.03□□□□□ -1.6
HMGCS1Q01581 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HMGCS1Q01581 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.03□□□□□ -1.6
HMGCS1Q01581 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.03□□□□□ -1.6
HMGCS1Q01581 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.03□□□□□ -1.6
HMGCS1Q01581 SUGT1P3-202ENST00000604259 383 ntBASIC5.03□□□□□ -1.6
HMGCS1Q01581 MIR6768-201ENST00000610734 72 ntBASIC5.03□□□□□ -1.6
HMGCS1Q01581 AC008833.1-201ENST00000611633 691 ntBASIC5.03□□□□□ -1.6
HMGCS1Q01581 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.03□□□□□ -1.6
HMGCS1Q01581 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.03□□□□□ -1.6
HMGCS1Q01581 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HMGCS1Q01581 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HMGCS1Q01581 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HMGCS1Q01581 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.03□□□□□ -1.6
HMGCS1Q01581 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HMGCS1Q01581 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.02□□□□□ -1.61
HMGCS1Q01581 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
HMGCS1Q01581 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HMGCS1Q01581 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HMGCS1Q01581 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HMGCS1Q01581 AC114947.2-201ENST00000565748 2125 ntBASIC5.02□□□□□ -1.61
HMGCS1Q01581 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
HMGCS1Q01581 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
HMGCS1Q01581 RN7SKP16-201ENST00000410180 299 ntBASIC5.02□□□□□ -1.61
HMGCS1Q01581 PCNPP4-201ENST00000414817 517 ntBASIC5.02□□□□□ -1.61
HMGCS1Q01581 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.02□□□□□ -1.61
HMGCS1Q01581 AC079355.1-201ENST00000421770 223 ntBASIC5.02□□□□□ -1.61
HMGCS1Q01581 CYCSP6-201ENST00000434498 302 ntBASIC5.02□□□□□ -1.61
HMGCS1Q01581 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
HMGCS1Q01581 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HMGCS1Q01581 RPSAP41-201ENST00000439695 860 ntBASIC5.02□□□□□ -1.61
HMGCS1Q01581 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.02□□□□□ -1.61
HMGCS1Q01581 RPL7P45-201ENST00000455851 743 ntBASIC5.02□□□□□ -1.61
HMGCS1Q01581 RPL7P40-201ENST00000481703 745 ntBASIC5.02□□□□□ -1.61
HMGCS1Q01581 RN7SL547P-201ENST00000490793 290 ntBASIC5.02□□□□□ -1.61
HMGCS1Q01581 AC138409.2-202ENST00000507274 458 ntBASIC5.02□□□□□ -1.61
HMGCS1Q01581 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.02□□□□□ -1.61
HMGCS1Q01581 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.02□□□□□ -1.61
HMGCS1Q01581 AC006427.1-201ENST00000514359 712 ntBASIC5.02□□□□□ -1.61
HMGCS1Q01581 RNU6-941P-201ENST00000516346 108 ntBASIC5.02□□□□□ -1.61
HMGCS1Q01581 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.02□□□□□ -1.61
HMGCS1Q01581 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.02□□□□□ -1.61
HMGCS1Q01581 AC027026.1-201ENST00000532323 742 ntBASIC5.02□□□□□ -1.61
HMGCS1Q01581 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HMGCS1Q01581 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.02□□□□□ -1.61
HMGCS1Q01581 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.02□□□□□ -1.61
HMGCS1Q01581 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms