Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VSX2P58304 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
VSX2P58304 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VSX2P58304 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VSX2P58304 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VSX2P58304 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VSX2P58304 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
VSX2P58304 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VSX2P58304 SNORA70.6-201ENST00000383934 134 ntBASIC5.1□□□□□ -1.59
VSX2P58304 AL590763.1-201ENST00000398297 1545 ntBASIC5.1□□□□□ -1.59
VSX2P58304 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
VSX2P58304 RN7SKP278-201ENST00000410504 342 ntBASIC5.1□□□□□ -1.59
VSX2P58304 AC016769.2-201ENST00000414815 475 ntBASIC5.1□□□□□ -1.59
VSX2P58304 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.1□□□□□ -1.59
VSX2P58304 C4BPAP1-201ENST00000415474 1893 ntBASIC5.1□□□□□ -1.59
VSX2P58304 AC108075.1-201ENST00000424692 529 ntBASIC5.1□□□□□ -1.59
VSX2P58304 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.1□□□□□ -1.59
VSX2P58304 AC245047.2-201ENST00000441060 530 ntBASIC5.1□□□□□ -1.59
VSX2P58304 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.1□□□□□ -1.59
VSX2P58304 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
VSX2P58304 AURKAPS1-201ENST00000451805 1212 ntBASIC5.1□□□□□ -1.59
VSX2P58304 AC104634.1-201ENST00000452720 462 ntBASIC5.1□□□□□ -1.59
VSX2P58304 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.1□□□□□ -1.59
VSX2P58304 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
VSX2P58304 RN7SL197P-201ENST00000466981 299 ntBASIC5.1□□□□□ -1.59
VSX2P58304 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.1□□□□□ -1.59
VSX2P58304 RPL7P40-201ENST00000481703 745 ntBASIC5.1□□□□□ -1.59
VSX2P58304 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.1□□□□□ -1.59
VSX2P58304 AC058823.1-201ENST00000485315 474 ntBASIC5.1□□□□□ -1.59
VSX2P58304 RN7SL423P-201ENST00000486202 304 ntBASIC5.1□□□□□ -1.59
VSX2P58304 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.1□□□□□ -1.59
VSX2P58304 SUMO2P4-201ENST00000504193 276 ntBASIC5.1□□□□□ -1.59
VSX2P58304 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.1□□□□□ -1.59
VSX2P58304 AC138832.1-201ENST00000522871 556 ntBASIC5.1□□□□□ -1.59
VSX2P58304 AC009852.2-201ENST00000567898 485 ntBASIC5.1□□□□□ -1.59
VSX2P58304 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VSX2P58304 MIR4443-201ENST00000585052 53 ntBASIC5.1□□□□□ -1.59
VSX2P58304 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.1□□□□□ -1.59
VSX2P58304 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.1□□□□□ -1.59
VSX2P58304 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.1□□□□□ -1.59
VSX2P58304 AC069307.1-201ENST00000602820 447 ntBASIC5.1□□□□□ -1.59
VSX2P58304 SDR42E1P1-201ENST00000611327 477 ntBASIC5.1□□□□□ -1.59
VSX2P58304 AC007786.3-201ENST00000615154 596 ntBASIC5.1□□□□□ -1.59
VSX2P58304 AC100757.1-201ENST00000616872 1835 ntBASIC5.1□□□□□ -1.59
VSX2P58304 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
VSX2P58304 AC083843.2-201ENST00000568248 6253 ntBASIC5.1□□□□□ -1.59
VSX2P58304 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VSX2P58304 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VSX2P58304 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
VSX2P58304 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
VSX2P58304 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VSX2P58304 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
VSX2P58304 ICE2P1-201ENST00000512800 1849 ntBASIC5.09□□□□□ -1.59
VSX2P58304 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
VSX2P58304 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
VSX2P58304 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VSX2P58304 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.09□□□□□ -1.59
VSX2P58304 RNU1-43P-201ENST00000365052 165 ntBASIC5.09□□□□□ -1.59
VSX2P58304 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
VSX2P58304 AL358178.1-201ENST00000407698 397 ntBASIC5.09□□□□□ -1.59
VSX2P58304 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.09□□□□□ -1.59
VSX2P58304 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VSX2P58304 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.09□□□□□ -1.59
VSX2P58304 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.09□□□□□ -1.59
VSX2P58304 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.09□□□□□ -1.59
VSX2P58304 OR52B5P-201ENST00000435337 951 ntBASIC5.09□□□□□ -1.59
VSX2P58304 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.09□□□□□ -1.59
VSX2P58304 FAR2P1-206ENST00000449736 709 ntBASIC5.09□□□□□ -1.59
VSX2P58304 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.09□□□□□ -1.59
VSX2P58304 AL035090.1-201ENST00000454835 332 ntBASIC5.09□□□□□ -1.59
VSX2P58304 AC015864.1-201ENST00000496512 544 ntBASIC5.09□□□□□ -1.59
VSX2P58304 AC072052.1-201ENST00000496556 306 ntBASIC5.09□□□□□ -1.59
VSX2P58304 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.09□□□□□ -1.59
VSX2P58304 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.09□□□□□ -1.59
VSX2P58304 AC016180.1-201ENST00000567945 403 ntBASIC5.09□□□□□ -1.59
VSX2P58304 MIR4660-201ENST00000583549 74 ntBASIC5.09□□□□□ -1.59
VSX2P58304 AC005252.1-201ENST00000604518 1063 ntBASIC5.09□□□□□ -1.59
VSX2P58304 AC244107.2-201ENST00000611773 76 ntBASIC5.09□□□□□ -1.59
VSX2P58304 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.09□□□□□ -1.59
VSX2P58304 MIR6133-201ENST00000617057 108 ntBASIC5.09□□□□□ -1.59
VSX2P58304 OR52B5P-202ENST00000641118 1110 ntBASIC5.09□□□□□ -1.59
VSX2P58304 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VSX2P58304 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VSX2P58304 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VSX2P58304 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VSX2P58304 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VSX2P58304 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VSX2P58304 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
VSX2P58304 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.09□□□□□ -1.6
VSX2P58304 MRRFP1-201ENST00000435941 1675 ntBASIC5.08□□□□□ -1.6
VSX2P58304 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
VSX2P58304 AC083899.1-201ENST00000454465 3819 ntBASIC5.08□□□□□ -1.6
VSX2P58304 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.08□□□□□ -1.6
VSX2P58304 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
VSX2P58304 U3.2-201ENST00000362981 210 ntBASIC5.08□□□□□ -1.6
VSX2P58304 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
VSX2P58304 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
VSX2P58304 AL445213.1-201ENST00000412589 747 ntBASIC5.08□□□□□ -1.6
VSX2P58304 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.08□□□□□ -1.6
VSX2P58304 AC093655.2-201ENST00000425735 631 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 358.7 ms