Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 MTCYBP22-201ENST00000603788 447 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC6.07□□□□□ -1.44
GFRA1P56159 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC6.07□□□□□ -1.44
GFRA1P56159 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 AC009509.4-201ENST00000619202 509 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 AC131009.3-201ENST00000621809 287 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 AL160394.1-201ENST00000624765 724 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 AC068870.3-201ENST00000625077 2536 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 Z93929.1-201ENST00000418200 1475 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
GFRA1P56159 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.07□□□□□ -1.44
GFRA1P56159 SPATA31C1-201ENST00000420021 3895 ntBASIC6.07□□□□□ -1.44
GFRA1P56159 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
GFRA1P56159 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.07□□□□□ -1.44
GFRA1P56159 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.07□□□□□ -1.44
GFRA1P56159 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA1P56159 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA1P56159 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.06□□□□□ -1.44
GFRA1P56159 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA1P56159 AL117339.4-201ENST00000608335 7063 ntBASIC6.06□□□□□ -1.44
GFRA1P56159 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA1P56159 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA1P56159 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.06□□□□□ -1.44
GFRA1P56159 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA1P56159 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.06□□□□□ -1.44
GFRA1P56159 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA1P56159 AL133243.4-201ENST00000623116 3109 ntBASIC6.06□□□□□ -1.44
GFRA1P56159 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC6.06□□□□□ -1.44
GFRA1P56159 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA1P56159 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
GFRA1P56159 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC6.06□□□□□ -1.44
GFRA1P56159 AC016251.2-201ENST00000623393 3089 ntBASIC6.06□□□□□ -1.44
GFRA1P56159 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA1P56159 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
GFRA1P56159 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA1P56159 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
GFRA1P56159 CDC27P2-201ENST00000425026 1922 ntBASIC6.06□□□□□ -1.44
GFRA1P56159 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA1P56159 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA1P56159 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA1P56159 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
GFRA1P56159 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
GFRA1P56159 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA1P56159 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA1P56159 RNA5SP65-201ENST00000363166 119 ntBASIC6.06□□□□□ -1.44
GFRA1P56159 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA1P56159 RNU6-1119P-201ENST00000384349 108 ntBASIC6.06□□□□□ -1.44
GFRA1P56159 RNU6-729P-201ENST00000384399 107 ntBASIC6.06□□□□□ -1.44
GFRA1P56159 RNU6-1300P-201ENST00000391046 108 ntBASIC6.06□□□□□ -1.44
GFRA1P56159 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA1P56159 RNU6ATAC25P-201ENST00000408798 117 ntBASIC6.06□□□□□ -1.44
GFRA1P56159 AC007899.1-201ENST00000412776 775 ntBASIC6.06□□□□□ -1.44
GFRA1P56159 RPS26P38-201ENST00000414476 348 ntBASIC6.06□□□□□ -1.44
GFRA1P56159 CDK8P2-201ENST00000415020 547 ntBASIC6.06□□□□□ -1.44
GFRA1P56159 RPL23AP39-201ENST00000415533 405 ntBASIC6.06□□□□□ -1.44
GFRA1P56159 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.06□□□□□ -1.44
GFRA1P56159 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.06□□□□□ -1.44
GFRA1P56159 AC008753.1-201ENST00000423096 284 ntBASIC6.06□□□□□ -1.44
GFRA1P56159 Z93242.1-201ENST00000427102 353 ntBASIC6.06□□□□□ -1.44
GFRA1P56159 RPL7P4-203ENST00000430239 730 ntBASIC6.06□□□□□ -1.44
GFRA1P56159 MTND1P4-201ENST00000435196 415 ntBASIC6.06□□□□□ -1.44
GFRA1P56159 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.06□□□□□ -1.44
GFRA1P56159 Z74696.2-201ENST00000436514 498 ntBASIC6.06□□□□□ -1.44
GFRA1P56159 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.06□□□□□ -1.44
GFRA1P56159 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.06□□□□□ -1.44
GFRA1P56159 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC6.06□□□□□ -1.44
GFRA1P56159 ZNF114P1-201ENST00000453500 292 ntBASIC6.06□□□□□ -1.44
GFRA1P56159 SNRPGP9-201ENST00000456025 225 ntBASIC6.06□□□□□ -1.44
GFRA1P56159 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
GFRA1P56159 RN7SL393P-201ENST00000463588 296 ntBASIC6.06□□□□□ -1.44
GFRA1P56159 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA1P56159 RN7SL836P-201ENST00000476140 296 ntBASIC6.06□□□□□ -1.44
GFRA1P56159 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA1P56159 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.06□□□□□ -1.44
GFRA1P56159 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.06□□□□□ -1.44
GFRA1P56159 AL390198.2-201ENST00000510553 222 ntBASIC6.06□□□□□ -1.44
GFRA1P56159 OR52H2P-201ENST00000514607 902 ntBASIC6.06□□□□□ -1.44
GFRA1P56159 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC6.06□□□□□ -1.44
GFRA1P56159 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.06□□□□□ -1.44
GFRA1P56159 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA1P56159 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.06□□□□□ -1.44
GFRA1P56159 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC6.06□□□□□ -1.44
GFRA1P56159 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.06□□□□□ -1.44
GFRA1P56159 PCNPP1-201ENST00000552501 511 ntBASIC6.06□□□□□ -1.44
GFRA1P56159 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.06□□□□□ -1.44
GFRA1P56159 NOP10-202ENST00000557912 436 ntTSL 2 BASIC6.06□□□□□ -1.44
GFRA1P56159 AC091304.4-201ENST00000565703 620 ntBASIC6.06□□□□□ -1.44
GFRA1P56159 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.06□□□□□ -1.44
GFRA1P56159 MIR3157-201ENST00000578688 85 ntBASIC6.06□□□□□ -1.44
GFRA1P56159 RN7SL270P-201ENST00000579643 281 ntBASIC6.06□□□□□ -1.44
GFRA1P56159 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.06□□□□□ -1.44
GFRA1P56159 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC6.06□□□□□ -1.44
GFRA1P56159 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.06□□□□□ -1.44
GFRA1P56159 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA1P56159 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC6.06□□□□□ -1.44
GFRA1P56159 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.06□□□□□ -1.44
GFRA1P56159 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.06□□□□□ -1.44
GFRA1P56159 AC091946.2-201ENST00000606105 291 ntBASIC6.06□□□□□ -1.44
GFRA1P56159 AC012360.2-201ENST00000609349 391 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms