Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CDH13P55290 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDH13P55290 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CDH13P55290 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDH13P55290 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDH13P55290 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDH13P55290 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDH13P55290 AC017002.4-201ENST00000604721 1525 ntBASIC5.34□□□□□ -1.55
CDH13P55290 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.34□□□□□ -1.55
CDH13P55290 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDH13P55290 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDH13P55290 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDH13P55290 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDH13P55290 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDH13P55290 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDH13P55290 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CDH13P55290 MIR375-201ENST00000362103 64 ntBASIC5.34□□□□□ -1.55
CDH13P55290 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH13P55290 ARAFP2-201ENST00000440565 559 ntBASIC5.34□□□□□ -1.55
CDH13P55290 AC245517.2-201ENST00000442890 346 ntBASIC5.34□□□□□ -1.55
CDH13P55290 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.34□□□□□ -1.55
CDH13P55290 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH13P55290 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.55
CDH13P55290 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH13P55290 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH13P55290 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.34□□□□□ -1.55
CDH13P55290 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.34□□□□□ -1.55
CDH13P55290 HMGN1P9-201ENST00000515212 298 ntBASIC5.34□□□□□ -1.55
CDH13P55290 SCARNA20.4-201ENST00000516969 131 ntBASIC5.34□□□□□ -1.55
CDH13P55290 SNORA43.3-201ENST00000517240 103 ntBASIC5.34□□□□□ -1.55
CDH13P55290 AC020937.1-201ENST00000519677 1013 ntBASIC5.34□□□□□ -1.55
CDH13P55290 AC092709.1-201ENST00000521355 1045 ntBASIC5.34□□□□□ -1.55
CDH13P55290 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.34□□□□□ -1.55
CDH13P55290 OR11H3P-201ENST00000554547 982 ntBASIC5.34□□□□□ -1.55
CDH13P55290 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH13P55290 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.34□□□□□ -1.55
CDH13P55290 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.34□□□□□ -1.55
CDH13P55290 AC067773.1-201ENST00000603284 1094 ntBASIC5.34□□□□□ -1.55
CDH13P55290 AC015660.5-201ENST00000623238 564 ntBASIC5.34□□□□□ -1.55
CDH13P55290 AC079298.2-201ENST00000623885 459 ntBASIC5.34□□□□□ -1.55
CDH13P55290 AC135068.5-201ENST00000624197 983 ntBASIC5.34□□□□□ -1.55
CDH13P55290 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.34□□□□□ -1.55
CDH13P55290 AC129915.3-201ENST00000634128 948 ntBASIC5.34□□□□□ -1.55
CDH13P55290 CFTRP2-201ENST00000634304 199 ntBASIC5.34□□□□□ -1.55
CDH13P55290 AC006453.5-201ENST00000636451 619 ntBASIC5.34□□□□□ -1.55
CDH13P55290 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDH13P55290 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.34□□□□□ -1.55
CDH13P55290 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDH13P55290 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDH13P55290 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CDH13P55290 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
CDH13P55290 AC132825.1-201ENST00000463573 2247 ntBASIC5.33□□□□□ -1.56
CDH13P55290 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.33□□□□□ -1.56
CDH13P55290 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDH13P55290 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CDH13P55290 AC114786.1-201ENST00000512892 1415 ntBASIC5.33□□□□□ -1.56
CDH13P55290 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.33□□□□□ -1.56
CDH13P55290 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CDH13P55290 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.33□□□□□ -1.56
CDH13P55290 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CDH13P55290 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDH13P55290 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDH13P55290 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.33□□□□□ -1.56
CDH13P55290 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CDH13P55290 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CDH13P55290 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDH13P55290 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.33□□□□□ -1.56
CDH13P55290 UBE2V1P15-201ENST00000407776 448 ntBASIC5.33□□□□□ -1.56
CDH13P55290 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.33□□□□□ -1.56
CDH13P55290 MTCYBP7-201ENST00000419540 1134 ntBASIC5.33□□□□□ -1.56
CDH13P55290 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.33□□□□□ -1.56
CDH13P55290 AL662874.1-201ENST00000426065 230 ntBASIC5.33□□□□□ -1.56
CDH13P55290 MTND4LP7-201ENST00000431728 294 ntBASIC5.33□□□□□ -1.56
CDH13P55290 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.33□□□□□ -1.56
CDH13P55290 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDH13P55290 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.33□□□□□ -1.56
CDH13P55290 AC005297.1-201ENST00000444765 862 ntBASIC5.33□□□□□ -1.56
CDH13P55290 AL627224.1-201ENST00000448334 444 ntBASIC5.33□□□□□ -1.56
CDH13P55290 NPM1P19-201ENST00000450070 712 ntBASIC5.33□□□□□ -1.56
CDH13P55290 VDAC2P4-201ENST00000452925 711 ntBASIC5.33□□□□□ -1.56
CDH13P55290 AC011476.1-201ENST00000466725 307 ntBASIC5.33□□□□□ -1.56
CDH13P55290 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.33□□□□□ -1.56
CDH13P55290 SETP12-201ENST00000514068 805 ntBASIC5.33□□□□□ -1.56
CDH13P55290 RNA5SP271-201ENST00000516700 88 ntBASIC5.33□□□□□ -1.56
CDH13P55290 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.33□□□□□ -1.56
CDH13P55290 AL359219.2-201ENST00000555184 348 ntBASIC5.33□□□□□ -1.56
CDH13P55290 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.33□□□□□ -1.56
CDH13P55290 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
CDH13P55290 AL023583.1-201ENST00000607518 1143 ntBASIC5.33□□□□□ -1.56
CDH13P55290 AC019131.2-201ENST00000609071 870 ntBASIC5.33□□□□□ -1.56
CDH13P55290 uc_338.7-201ENST00000621834 124 ntBASIC5.33□□□□□ -1.56
CDH13P55290 AL356490.1-201ENST00000623079 479 ntBASIC5.33□□□□□ -1.56
CDH13P55290 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.33□□□□□ -1.56
CDH13P55290 AC092159.4-201ENST00000624944 550 ntBASIC5.33□□□□□ -1.56
CDH13P55290 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.33□□□□□ -1.56
CDH13P55290 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CDH13P55290 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.33□□□□□ -1.56
CDH13P55290 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.33□□□□□ -1.56
CDH13P55290 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDH13P55290 AL450345.1-202ENST00000605741 3881 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms