Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.44□□□□□ -1.54
HNF4AP41235 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HNF4AP41235 RN7SL544P-201ENST00000617232 284 ntBASIC5.44□□□□□ -1.54
HNF4AP41235 RN7SL763P-201ENST00000620922 284 ntBASIC5.44□□□□□ -1.54
HNF4AP41235 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
HNF4AP41235 AC019080.5-201ENST00000624891 757 ntBASIC5.44□□□□□ -1.54
HNF4AP41235 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.44□□□□□ -1.54
HNF4AP41235 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.44□□□□□ -1.54
HNF4AP41235 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HNF4AP41235 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.44□□□□□ -1.54
HNF4AP41235 MIR193BHG-214ENST00000641765 509 ntBASIC5.44□□□□□ -1.54
HNF4AP41235 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.44□□□□□ -1.54
HNF4AP41235 AC107027.3-201ENST00000565095 3473 ntBASIC5.44□□□□□ -1.54
HNF4AP41235 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
HNF4AP41235 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.44□□□□□ -1.54
HNF4AP41235 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.44□□□□□ -1.54
HNF4AP41235 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HNF4AP41235 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
HNF4AP41235 TCP11X1-202ENST00000622971 1372 ntBASIC5.43□□□□□ -1.54
HNF4AP41235 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HNF4AP41235 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HNF4AP41235 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HNF4AP41235 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HNF4AP41235 PWAR1-201ENST00000624188 2414 ntBASIC5.43□□□□□ -1.54
HNF4AP41235 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.43□□□□□ -1.54
HNF4AP41235 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HNF4AP41235 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.43□□□□□ -1.54
HNF4AP41235 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.43□□□□□ -1.54
HNF4AP41235 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HNF4AP41235 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HNF4AP41235 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
HNF4AP41235 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.43□□□□□ -1.54
HNF4AP41235 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.43□□□□□ -1.54
HNF4AP41235 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.43□□□□□ -1.54
HNF4AP41235 AC009302.1-201ENST00000417147 390 ntBASIC5.43□□□□□ -1.54
HNF4AP41235 BTF3P9-201ENST00000418784 283 ntBASIC5.43□□□□□ -1.54
HNF4AP41235 OR5M12P-201ENST00000423388 929 ntBASIC5.43□□□□□ -1.54
HNF4AP41235 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.43□□□□□ -1.54
HNF4AP41235 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.43□□□□□ -1.54
HNF4AP41235 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.43□□□□□ -1.54
HNF4AP41235 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.43□□□□□ -1.54
HNF4AP41235 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.43□□□□□ -1.54
HNF4AP41235 AC023271.1-201ENST00000445936 1090 ntBASIC5.43□□□□□ -1.54
HNF4AP41235 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.43□□□□□ -1.54
HNF4AP41235 AL596266.1-201ENST00000448132 400 ntBASIC5.43□□□□□ -1.54
HNF4AP41235 NPM1P19-201ENST00000450070 712 ntBASIC5.43□□□□□ -1.54
HNF4AP41235 AL445665.1-202ENST00000452436 324 ntBASIC5.43□□□□□ -1.54
HNF4AP41235 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.43□□□□□ -1.54
HNF4AP41235 RN7SL188P-201ENST00000469842 285 ntBASIC5.43□□□□□ -1.54
HNF4AP41235 AC087672.1-201ENST00000479876 766 ntBASIC5.43□□□□□ -1.54
HNF4AP41235 DUTP7-201ENST00000507982 486 ntBASIC5.43□□□□□ -1.54
HNF4AP41235 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.43□□□□□ -1.54
HNF4AP41235 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.43□□□□□ -1.54
HNF4AP41235 AC112191.2-201ENST00000522428 333 ntBASIC5.43□□□□□ -1.54
HNF4AP41235 OR4A17P-201ENST00000526032 904 ntBASIC5.43□□□□□ -1.54
HNF4AP41235 AP004609.2-201ENST00000532177 190 ntBASIC5.43□□□□□ -1.54
HNF4AP41235 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.43□□□□□ -1.54
HNF4AP41235 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.43□□□□□ -1.54
HNF4AP41235 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.43□□□□□ -1.54
HNF4AP41235 AC092868.3-201ENST00000560515 784 ntBASIC5.43□□□□□ -1.54
HNF4AP41235 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.43□□□□□ -1.54
HNF4AP41235 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.43□□□□□ -1.54
HNF4AP41235 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.43□□□□□ -1.54
HNF4AP41235 AC145207.9-201ENST00000623802 325 ntBASIC5.43□□□□□ -1.54
HNF4AP41235 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.43□□□□□ -1.54
HNF4AP41235 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.43□□□□□ -1.54
HNF4AP41235 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HNF4AP41235 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
HNF4AP41235 SRRM1P3-201ENST00000426911 2678 ntBASIC5.43□□□□□ -1.54
HNF4AP41235 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
HNF4AP41235 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
HNF4AP41235 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HNF4AP41235 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.43□□□□□ -1.54
HNF4AP41235 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HNF4AP41235 AL138820.1-201ENST00000617901 5305 ntBASIC5.42□□□□□ -1.54
HNF4AP41235 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
HNF4AP41235 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HNF4AP41235 AC083843.2-201ENST00000568248 6253 ntBASIC5.42□□□□□ -1.54
HNF4AP41235 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HNF4AP41235 OR9K1P-202ENST00000641111 3217 ntBASIC5.42□□□□□ -1.54
HNF4AP41235 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
HNF4AP41235 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
HNF4AP41235 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.42□□□□□ -1.54
HNF4AP41235 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
HNF4AP41235 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
HNF4AP41235 DHFRP5-201ENST00000406944 564 ntBASIC5.42□□□□□ -1.54
HNF4AP41235 RIMKLBP2-201ENST00000424737 654 ntBASIC5.42□□□□□ -1.54
HNF4AP41235 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.42□□□□□ -1.54
HNF4AP41235 FHP1-201ENST00000442741 703 ntBASIC5.42□□□□□ -1.54
HNF4AP41235 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HNF4AP41235 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.42□□□□□ -1.54
HNF4AP41235 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.42□□□□□ -1.54
HNF4AP41235 RPL12P24-201ENST00000474907 486 ntBASIC5.42□□□□□ -1.54
HNF4AP41235 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HNF4AP41235 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.42□□□□□ -1.54
HNF4AP41235 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.42□□□□□ -1.54
HNF4AP41235 SNORA43.3-201ENST00000517240 103 ntBASIC5.42□□□□□ -1.54
HNF4AP41235 IGLV3-24-201ENST00000517477 197 ntBASIC5.42□□□□□ -1.54
HNF4AP41235 FTH1P11-201ENST00000517577 551 ntBASIC5.42□□□□□ -1.54
HNF4AP41235 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms