Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
HADHAP40939 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.71□□□□□ -1.5
HADHAP40939 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.71□□□□□ -1.5
HADHAP40939 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.71□□□□□ -1.5
HADHAP40939 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.71□□□□□ -1.5
HADHAP40939 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HADHAP40939 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HADHAP40939 AL159987.1-201ENST00000347911 293 ntBASIC5.71□□□□□ -1.5
HADHAP40939 RNU1-146P-201ENST00000364015 165 ntBASIC5.71□□□□□ -1.5
HADHAP40939 RNA5SP284-201ENST00000384547 118 ntBASIC5.71□□□□□ -1.5
HADHAP40939 LYPLA1P3-201ENST00000402650 695 ntBASIC5.71□□□□□ -1.5
HADHAP40939 AC096921.1-201ENST00000411661 375 ntBASIC5.71□□□□□ -1.5
HADHAP40939 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.71□□□□□ -1.5
HADHAP40939 AC245060.4-201ENST00000413293 1121 ntBASIC5.71□□□□□ -1.5
HADHAP40939 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.71□□□□□ -1.5
HADHAP40939 RPS26P4-201ENST00000431743 355 ntBASIC5.71□□□□□ -1.5
HADHAP40939 TMEM183AP1-205ENST00000432739 290 ntBASIC5.71□□□□□ -1.5
HADHAP40939 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.71□□□□□ -1.5
HADHAP40939 PPIAP20-201ENST00000449839 135 ntBASIC5.71□□□□□ -1.5
HADHAP40939 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.71□□□□□ -1.5
HADHAP40939 AC018638.3-201ENST00000461273 132 ntBASIC5.71□□□□□ -1.5
HADHAP40939 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.71□□□□□ -1.5
HADHAP40939 RPL32P33-201ENST00000487023 394 ntBASIC5.71□□□□□ -1.5
HADHAP40939 AC073610.1-201ENST00000489971 396 ntBASIC5.71□□□□□ -1.5
HADHAP40939 NPM1P28-201ENST00000492269 840 ntBASIC5.71□□□□□ -1.5
HADHAP40939 AC009120.1-201ENST00000493458 473 ntBASIC5.71□□□□□ -1.5
HADHAP40939 DUTP1-201ENST00000493631 470 ntBASIC5.71□□□□□ -1.5
HADHAP40939 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HADHAP40939 SETP12-201ENST00000514068 805 ntBASIC5.71□□□□□ -1.5
HADHAP40939 SNORD46.2-201ENST00000516021 102 ntBASIC5.71□□□□□ -1.5
HADHAP40939 AC109635.6-201ENST00000525487 1113 ntBASIC5.71□□□□□ -1.5
HADHAP40939 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.71□□□□□ -1.5
HADHAP40939 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HADHAP40939 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.71□□□□□ -1.5
HADHAP40939 AGGF1P7-201ENST00000562369 913 ntBASIC5.71□□□□□ -1.5
HADHAP40939 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.71□□□□□ -1.5
HADHAP40939 AP001496.3-201ENST00000580230 913 ntBASIC5.71□□□□□ -1.5
HADHAP40939 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.71□□□□□ -1.5
HADHAP40939 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.71□□□□□ -1.5
HADHAP40939 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.71□□□□□ -1.5
HADHAP40939 AC011445.2-201ENST00000599274 173 ntBASIC5.71□□□□□ -1.5
HADHAP40939 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.71□□□□□ -1.5
HADHAP40939 AL135786.2-201ENST00000608422 615 ntBASIC5.71□□□□□ -1.5
HADHAP40939 MIR6133-201ENST00000617057 108 ntBASIC5.71□□□□□ -1.5
HADHAP40939 RN7SL544P-201ENST00000617232 284 ntBASIC5.71□□□□□ -1.5
HADHAP40939 RN7SL763P-201ENST00000620922 284 ntBASIC5.71□□□□□ -1.5
HADHAP40939 AC127024.6-201ENST00000621598 424 ntBASIC5.71□□□□□ -1.5
HADHAP40939 AL356490.1-201ENST00000623079 479 ntBASIC5.71□□□□□ -1.5
HADHAP40939 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HADHAP40939 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
HADHAP40939 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HADHAP40939 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.71□□□□□ -1.5
HADHAP40939 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
HADHAP40939 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HADHAP40939 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HADHAP40939 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
HADHAP40939 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
HADHAP40939 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
HADHAP40939 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HADHAP40939 AC144833.1-201ENST00000567953 4089 ntBASIC5.7□□□□□ -1.5
HADHAP40939 OR52B3P-201ENST00000314715 928 ntBASIC5.7□□□□□ -1.5
HADHAP40939 AL121886.1-201ENST00000358609 435 ntBASIC5.7□□□□□ -1.5
HADHAP40939 SNORD51.1-201ENST00000365405 77 ntBASIC5.7□□□□□ -1.5
HADHAP40939 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.7□□□□□ -1.5
HADHAP40939 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HADHAP40939 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HADHAP40939 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HADHAP40939 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.7□□□□□ -1.5
HADHAP40939 OR51A6P-201ENST00000418680 1004 ntBASIC5.7□□□□□ -1.5
HADHAP40939 MTND6P12-201ENST00000428247 522 ntBASIC5.7□□□□□ -1.5
HADHAP40939 AL136231.1-201ENST00000429407 730 ntBASIC5.7□□□□□ -1.5
HADHAP40939 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.7□□□□□ -1.5
HADHAP40939 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.7□□□□□ -1.5
HADHAP40939 GAPDHP48-201ENST00000436626 961 ntBASIC5.7□□□□□ -1.5
HADHAP40939 MTND2P40-201ENST00000436718 841 ntBASIC5.7□□□□□ -1.5
HADHAP40939 MTND4P15-201ENST00000437913 1033 ntBASIC5.7□□□□□ -1.5
HADHAP40939 AL445665.1-202ENST00000452436 324 ntBASIC5.7□□□□□ -1.5
HADHAP40939 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.7□□□□□ -1.5
HADHAP40939 HAUS1P1-201ENST00000505275 832 ntBASIC5.7□□□□□ -1.5
HADHAP40939 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.7□□□□□ -1.5
HADHAP40939 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.7□□□□□ -1.5
HADHAP40939 AC021146.7-201ENST00000509604 775 ntBASIC5.7□□□□□ -1.5
HADHAP40939 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.7□□□□□ -1.5
HADHAP40939 AC020937.1-201ENST00000519677 1013 ntBASIC5.7□□□□□ -1.5
HADHAP40939 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.7□□□□□ -1.5
HADHAP40939 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.7□□□□□ -1.5
HADHAP40939 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.7□□□□□ -1.5
HADHAP40939 AC087888.1-201ENST00000550884 1254 ntBASIC5.7□□□□□ -1.5
HADHAP40939 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.7□□□□□ -1.5
HADHAP40939 AC018552.1-201ENST00000562099 811 ntBASIC5.7□□□□□ -1.5
HADHAP40939 DHFRP1-201ENST00000579682 559 ntBASIC5.7□□□□□ -1.5
HADHAP40939 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.7□□□□□ -1.5
HADHAP40939 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.7□□□□□ -1.5
HADHAP40939 AL139124.1-201ENST00000609123 421 ntBASIC5.7□□□□□ -1.5
HADHAP40939 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.7□□□□□ -1.5
HADHAP40939 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.7□□□□□ -1.5
HADHAP40939 AL356094.1-201ENST00000624663 1212 ntBASIC5.7□□□□□ -1.5
HADHAP40939 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.7□□□□□ -1.5
HADHAP40939 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.7□□□□□ -1.5
HADHAP40939 AC106872.5-201ENST00000508856 1416 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 587.9 ms