Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM23P36406 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
TRIM23P36406 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM23P36406 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
TRIM23P36406 AC006206.1-201ENST00000544842 3387 ntBASIC5.38□□□□□ -1.55
TRIM23P36406 AC007938.2-201ENST00000604666 2634 ntBASIC5.38□□□□□ -1.55
TRIM23P36406 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM23P36406 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM23P36406 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC5.38□□□□□ -1.55
TRIM23P36406 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM23P36406 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.38□□□□□ -1.55
TRIM23P36406 GSTM5P1-201ENST00000434751 660 ntBASIC5.38□□□□□ -1.55
TRIM23P36406 OR52B5P-201ENST00000435337 951 ntBASIC5.38□□□□□ -1.55
TRIM23P36406 AL627308.1-201ENST00000435693 821 ntBASIC5.38□□□□□ -1.55
TRIM23P36406 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM23P36406 GAPDHP25-201ENST00000447061 1001 ntBASIC5.38□□□□□ -1.55
TRIM23P36406 RPS23P9-201ENST00000448848 438 ntBASIC5.38□□□□□ -1.55
TRIM23P36406 AL035090.1-201ENST00000454835 332 ntBASIC5.38□□□□□ -1.55
TRIM23P36406 RN7SL172P-201ENST00000460535 303 ntBASIC5.38□□□□□ -1.55
TRIM23P36406 AC110749.1-201ENST00000462007 357 ntBASIC5.38□□□□□ -1.55
TRIM23P36406 RPS4XP1-201ENST00000482189 787 ntBASIC5.38□□□□□ -1.55
TRIM23P36406 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.38□□□□□ -1.55
TRIM23P36406 AC093763.2-201ENST00000505334 1223 ntBASIC5.38□□□□□ -1.55
TRIM23P36406 AP001960.1-201ENST00000506494 658 ntBASIC5.38□□□□□ -1.55
TRIM23P36406 AC021106.1-201ENST00000509020 1058 ntBASIC5.38□□□□□ -1.55
TRIM23P36406 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM23P36406 AL358913.1-201ENST00000554342 121 ntBASIC5.38□□□□□ -1.55
TRIM23P36406 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.38□□□□□ -1.55
TRIM23P36406 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.38□□□□□ -1.55
TRIM23P36406 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM23P36406 AC013244.1-201ENST00000604279 193 ntBASIC5.38□□□□□ -1.55
TRIM23P36406 SDR42E1P1-201ENST00000611327 477 ntBASIC5.38□□□□□ -1.55
TRIM23P36406 AC021766.1-201ENST00000624404 741 ntBASIC5.38□□□□□ -1.55
TRIM23P36406 OR52B5P-202ENST00000641118 1110 ntBASIC5.38□□□□□ -1.55
TRIM23P36406 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM23P36406 CUL4AP1-201ENST00000514750 1863 ntBASIC5.38□□□□□ -1.55
TRIM23P36406 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM23P36406 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM23P36406 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.38□□□□□ -1.55
TRIM23P36406 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM23P36406 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
TRIM23P36406 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM23P36406 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM23P36406 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM23P36406 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
TRIM23P36406 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM23P36406 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM23P36406 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
TRIM23P36406 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM23P36406 U3.7-201ENST00000363668 216 ntBASIC5.37□□□□□ -1.55
TRIM23P36406 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM23P36406 MIR223-201ENST00000385204 110 ntBASIC5.37□□□□□ -1.55
TRIM23P36406 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
TRIM23P36406 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
TRIM23P36406 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM23P36406 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
TRIM23P36406 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.37□□□□□ -1.55
TRIM23P36406 AL589765.3-201ENST00000446084 462 ntBASIC5.37□□□□□ -1.55
TRIM23P36406 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM23P36406 PSAT1P4-201ENST00000466500 526 ntBASIC5.37□□□□□ -1.55
TRIM23P36406 RPL7P6-201ENST00000480903 738 ntBASIC5.37□□□□□ -1.55
TRIM23P36406 AC079841.1-201ENST00000481228 950 ntBASIC5.37□□□□□ -1.55
TRIM23P36406 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM23P36406 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM23P36406 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM23P36406 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.37□□□□□ -1.55
TRIM23P36406 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM23P36406 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM23P36406 HMGB1P40-201ENST00000525121 540 ntBASIC5.37□□□□□ -1.55
TRIM23P36406 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM23P36406 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.37□□□□□ -1.55
TRIM23P36406 AC004825.1-201ENST00000555068 586 ntBASIC5.37□□□□□ -1.55
TRIM23P36406 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM23P36406 AL353729.2-201ENST00000605859 1249 ntBASIC5.37□□□□□ -1.55
TRIM23P36406 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM23P36406 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.37□□□□□ -1.55
TRIM23P36406 AC074101.1-201ENST00000637861 241 ntBASIC5.37□□□□□ -1.55
TRIM23P36406 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
TRIM23P36406 AC073869.8-201ENST00000641806 335 ntBASIC5.37□□□□□ -1.55
TRIM23P36406 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM23P36406 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM23P36406 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM23P36406 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM23P36406 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM23P36406 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
TRIM23P36406 AC092111.2-201ENST00000611627 1414 ntBASIC5.37□□□□□ -1.55
TRIM23P36406 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM23P36406 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM23P36406 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM23P36406 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM23P36406 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM23P36406 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM23P36406 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM23P36406 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM23P36406 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM23P36406 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM23P36406 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
TRIM23P36406 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
TRIM23P36406 MIR105-2-201ENST00000385083 81 ntBASIC5.36□□□□□ -1.55
TRIM23P36406 AL035696.2-201ENST00000407941 709 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms