Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC6.19□□□□□ -1.42
SCN4AP35499 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC6.19□□□□□ -1.42
SCN4AP35499 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SCN4AP35499 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SCN4AP35499 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.19□□□□□ -1.42
SCN4AP35499 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
SCN4AP35499 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SCN4AP35499 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SCN4AP35499 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC6.18□□□□□ -1.42
SCN4AP35499 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC6.18□□□□□ -1.42
SCN4AP35499 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SCN4AP35499 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SCN4AP35499 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.18□□□□□ -1.42
SCN4AP35499 RPS29P10-201ENST00000439197 166 ntBASIC6.18□□□□□ -1.42
SCN4AP35499 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.18□□□□□ -1.42
SCN4AP35499 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.18□□□□□ -1.42
SCN4AP35499 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC6.18□□□□□ -1.42
SCN4AP35499 ARL1-211ENST00000551828 776 ntTSL 5 BASIC6.18□□□□□ -1.42
SCN4AP35499 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC6.18□□□□□ -1.42
SCN4AP35499 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SCN4AP35499 AL445423.1-201ENST00000609941 536 ntBASIC6.18□□□□□ -1.42
SCN4AP35499 AP005131.7-201ENST00000610087 611 ntBASIC6.18□□□□□ -1.42
SCN4AP35499 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SCN4AP35499 FTO-223ENST00000640179 210 ntTSL 5 BASIC6.18□□□□□ -1.42
SCN4AP35499 AP001153.1-201ENST00000641024 338 ntBASIC6.18□□□□□ -1.42
SCN4AP35499 AC073869.8-201ENST00000641806 335 ntBASIC6.18□□□□□ -1.42
SCN4AP35499 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.18□□□□□ -1.42
SCN4AP35499 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SCN4AP35499 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SCN4AP35499 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
SCN4AP35499 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.18□□□□□ -1.42
SCN4AP35499 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.18□□□□□ -1.42
SCN4AP35499 KYNUP3-201ENST00000574386 1341 ntBASIC6.18□□□□□ -1.42
SCN4AP35499 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SCN4AP35499 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SCN4AP35499 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
SCN4AP35499 SNX10-203ENST00000409367 746 ntTSL 5 BASIC6.18□□□□□ -1.42
SCN4AP35499 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.18□□□□□ -1.42
SCN4AP35499 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.18□□□□□ -1.42
SCN4AP35499 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC6.18□□□□□ -1.42
SCN4AP35499 TXNP5-201ENST00000441043 315 ntBASIC6.18□□□□□ -1.42
SCN4AP35499 REG1CP-206ENST00000447469 496 ntBASIC6.18□□□□□ -1.42
SCN4AP35499 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC6.18□□□□□ -1.42
SCN4AP35499 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.18□□□□□ -1.42
SCN4AP35499 AC122688.1-201ENST00000541494 223 ntBASIC6.18□□□□□ -1.42
SCN4AP35499 AC005725.1-201ENST00000577346 2607 ntBASIC6.18□□□□□ -1.42
SCN4AP35499 AP001267.4-201ENST00000602598 545 ntBASIC6.18□□□□□ -1.42
SCN4AP35499 AL353729.2-201ENST00000605859 1249 ntBASIC6.18□□□□□ -1.42
SCN4AP35499 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC6.18□□□□□ -1.42
SCN4AP35499 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SCN4AP35499 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.17□□□□□ -1.42
SCN4AP35499 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SCN4AP35499 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SCN4AP35499 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
SCN4AP35499 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SCN4AP35499 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SCN4AP35499 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.17□□□□□ -1.42
SCN4AP35499 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SCN4AP35499 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SCN4AP35499 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SCN4AP35499 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SCN4AP35499 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC6.17□□□□□ -1.42
SCN4AP35499 SNORD125-201ENST00000459538 96 ntBASIC6.17□□□□□ -1.42
SCN4AP35499 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC6.17□□□□□ -1.42
SCN4AP35499 AC006427.1-201ENST00000514359 712 ntBASIC6.17□□□□□ -1.42
SCN4AP35499 ENPP7P9-201ENST00000514456 627 ntBASIC6.17□□□□□ -1.42
SCN4AP35499 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.17□□□□□ -1.42
SCN4AP35499 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC6.17□□□□□ -1.42
SCN4AP35499 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC6.17□□□□□ -1.42
SCN4AP35499 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.17□□□□□ -1.42
SCN4AP35499 TTC41P-205ENST00000551270 3963 ntBASIC6.17□□□□□ -1.42
SCN4AP35499 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SCN4AP35499 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SCN4AP35499 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SCN4AP35499 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
SCN4AP35499 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SCN4AP35499 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
SCN4AP35499 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SCN4AP35499 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SCN4AP35499 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
SCN4AP35499 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SCN4AP35499 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.16□□□□□ -1.42
SCN4AP35499 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SCN4AP35499 RNU1-74P-201ENST00000384108 171 ntBASIC6.16□□□□□ -1.42
SCN4AP35499 RN7SKP263-201ENST00000411194 309 ntBASIC6.16□□□□□ -1.42
SCN4AP35499 GTF2IP5-201ENST00000414608 731 ntBASIC6.16□□□□□ -1.42
SCN4AP35499 AC004074.1-201ENST00000421810 1063 ntBASIC6.16□□□□□ -1.42
SCN4AP35499 AC021876.1-201ENST00000425959 359 ntBASIC6.16□□□□□ -1.42
SCN4AP35499 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.16□□□□□ -1.42
SCN4AP35499 OR52A4P-201ENST00000472867 958 ntBASIC6.16□□□□□ -1.42
SCN4AP35499 AC025674.1-201ENST00000507074 324 ntBASIC6.16□□□□□ -1.42
SCN4AP35499 RN7SKP92-201ENST00000517266 244 ntBASIC6.16□□□□□ -1.42
SCN4AP35499 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
SCN4AP35499 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC6.16□□□□□ -1.42
SCN4AP35499 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.16□□□□□ -1.42
SCN4AP35499 AP003400.3-201ENST00000624904 346 ntBASIC6.16□□□□□ -1.42
SCN4AP35499 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.16□□□□□ -1.42
SCN4AP35499 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.16□□□□□ -1.42
SCN4AP35499 Z98755.1-201ENST00000407015 1384 ntBASIC6.16□□□□□ -1.42
SCN4AP35499 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms