Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AL109918.2-201ENST00000605188 279 ntBASIC8.25□□□□□ -1.09
RNF40O75150 AC000068.3-201ENST00000607934 427 ntBASIC8.25□□□□□ -1.09
RNF40O75150 MIR6745-201ENST00000612694 127 ntBASIC8.25□□□□□ -1.09
RNF40O75150 CNTNAP3P1-201ENST00000616657 906 ntBASIC8.25□□□□□ -1.09
RNF40O75150 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC8.25□□□□□ -1.09
RNF40O75150 AC006840.1-201ENST00000623069 542 ntBASIC8.25□□□□□ -1.09
RNF40O75150 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC8.25□□□□□ -1.09
RNF40O75150 STRADA-246ENST00000640397 1045 ntTSL 5 BASIC8.25□□□□□ -1.09
RNF40O75150 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC8.25□□□□□ -1.09
RNF40O75150 TRIM49-202ENST00000532501 1437 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
RNF40O75150 AC020549.1-201ENST00000536916 1440 ntBASIC8.25□□□□□ -1.09
RNF40O75150 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC8.25□□□□□ -1.09
RNF40O75150 SLC7A8-206ENST00000469263 3557 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
RNF40O75150 AC015689.2-201ENST00000528172 1738 ntBASIC8.25□□□□□ -1.09
RNF40O75150 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
RNF40O75150 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
RNF40O75150 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
RNF40O75150 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
RNF40O75150 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC8.25□□□□□ -1.09
RNF40O75150 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
RNF40O75150 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RNF40O75150 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
RNF40O75150 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC8.24□□□□□ -1.09
RNF40O75150 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
RNF40O75150 ALDOB-201ENST00000374855 2451 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RNF40O75150 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC8.24□□□□□ -1.09
RNF40O75150 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
RNF40O75150 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RNF40O75150 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
RNF40O75150 EHF-201ENST00000257831 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RNF40O75150 THAP12P1-201ENST00000398672 2203 ntBASIC8.24□□□□□ -1.09
RNF40O75150 Y_RNA.159-201ENST00000363674 87 ntBASIC8.24□□□□□ -1.09
RNF40O75150 RNY4P34-201ENST00000364779 95 ntBASIC8.24□□□□□ -1.09
RNF40O75150 AC073842.1-201ENST00000376482 342 ntTSL 5 BASIC8.24□□□□□ -1.09
RNF40O75150 SNORA70G-201ENST00000383923 142 ntBASIC8.24□□□□□ -1.09
RNF40O75150 RNU6-185P-201ENST00000384421 107 ntBASIC8.24□□□□□ -1.09
RNF40O75150 PEX12P1-201ENST00000400284 1048 ntBASIC8.24□□□□□ -1.09
RNF40O75150 RNU6-847P-201ENST00000411115 108 ntBASIC8.24□□□□□ -1.09
RNF40O75150 MTATP6P29-201ENST00000415057 132 ntBASIC8.24□□□□□ -1.09
RNF40O75150 AC092042.2-201ENST00000417304 331 ntBASIC8.24□□□□□ -1.09
RNF40O75150 Z93242.1-201ENST00000427102 353 ntBASIC8.24□□□□□ -1.09
RNF40O75150 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
RNF40O75150 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC8.24□□□□□ -1.09
RNF40O75150 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC8.24□□□□□ -1.09
RNF40O75150 CEACAMP4-201ENST00000457676 421 ntBASIC8.24□□□□□ -1.09
RNF40O75150 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC8.24□□□□□ -1.09
RNF40O75150 ALG13-214ENST00000482742 620 ntTSL 2 BASIC8.24□□□□□ -1.09
RNF40O75150 RN7SL869P-201ENST00000497032 300 ntBASIC8.24□□□□□ -1.09
RNF40O75150 MTCO2P24-201ENST00000515611 426 ntBASIC8.24□□□□□ -1.09
RNF40O75150 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC8.24□□□□□ -1.09
RNF40O75150 AP003467.2-201ENST00000520175 319 ntBASIC8.24□□□□□ -1.09
RNF40O75150 SLC22A10-203ENST00000526800 699 ntTSL 5 BASIC8.24□□□□□ -1.09
RNF40O75150 AP003119.1-201ENST00000533437 538 ntTSL 4 BASIC8.24□□□□□ -1.09
RNF40O75150 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC8.24□□□□□ -1.09
RNF40O75150 AC087241.2-201ENST00000535801 324 ntBASIC8.24□□□□□ -1.09
RNF40O75150 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC8.24□□□□□ -1.09
RNF40O75150 AP003174.3-201ENST00000537926 516 ntBASIC8.24□□□□□ -1.09
RNF40O75150 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC8.24□□□□□ -1.09
RNF40O75150 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC8.24□□□□□ -1.09
RNF40O75150 PRR13P4-201ENST00000577786 421 ntBASIC8.24□□□□□ -1.09
RNF40O75150 RN7SL154P-201ENST00000578043 324 ntBASIC8.24□□□□□ -1.09
RNF40O75150 OR7E19P-202ENST00000589942 844 ntBASIC8.24□□□□□ -1.09
RNF40O75150 AL137190.1-201ENST00000603288 282 ntBASIC8.24□□□□□ -1.09
RNF40O75150 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC8.24□□□□□ -1.09
RNF40O75150 AC115286.1-201ENST00000604298 434 ntBASIC8.24□□□□□ -1.09
RNF40O75150 AC112187.2-201ENST00000604345 283 ntBASIC8.24□□□□□ -1.09
RNF40O75150 AC021646.1-201ENST00000605469 484 ntBASIC8.24□□□□□ -1.09
RNF40O75150 AL080274.1-201ENST00000605565 220 ntBASIC8.24□□□□□ -1.09
RNF40O75150 AC090948.1-201ENST00000607464 549 ntBASIC8.24□□□□□ -1.09
RNF40O75150 AC103710.3-201ENST00000608157 948 ntBASIC8.24□□□□□ -1.09
RNF40O75150 ACACA-232ENST00000614438 569 ntTSL 2 BASIC8.24□□□□□ -1.09
RNF40O75150 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC8.24□□□□□ -1.09
RNF40O75150 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
RNF40O75150 AC091925.1-201ENST00000623204 462 ntBASIC8.24□□□□□ -1.09
RNF40O75150 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC8.24□□□□□ -1.09
RNF40O75150 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
RNF40O75150 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC8.24□□□□□ -1.09
RNF40O75150 AL157831.2-201ENST00000564681 3095 ntBASIC8.24□□□□□ -1.09
RNF40O75150 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RNF40O75150 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC8.24□□□□□ -1.09
RNF40O75150 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RNF40O75150 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
RNF40O75150 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC8.24□□□□□ -1.09
RNF40O75150 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC8.24□□□□□ -1.09
RNF40O75150 AL391262.1-201ENST00000556558 1992 ntBASIC8.24□□□□□ -1.09
RNF40O75150 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RNF40O75150 AC073342.2-201ENST00000595842 1800 ntBASIC8.24□□□□□ -1.09
RNF40O75150 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC8.24□□□□□ -1.09
RNF40O75150 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
RNF40O75150 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
RNF40O75150 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RNF40O75150 CKAP2P1-201ENST00000555477 2049 ntBASIC8.24□□□□□ -1.09
RNF40O75150 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC8.24□□□□□ -1.09
RNF40O75150 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RNF40O75150 SALL4P7-201ENST00000555779 3120 ntBASIC8.23□□□□□ -1.09
RNF40O75150 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RNF40O75150 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RNF40O75150 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
RNF40O75150 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
RNF40O75150 OR9M1P-202ENST00000641564 3163 ntBASIC8.23□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms