Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.15□□□□□ -1.75
SSSCA1O60232 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.15□□□□□ -1.75
SSSCA1O60232 EEF1B2P6-201ENST00000445713 673 ntBASIC4.15□□□□□ -1.75
SSSCA1O60232 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SSSCA1O60232 LRRC37A14P-201ENST00000452297 462 ntBASIC4.15□□□□□ -1.75
SSSCA1O60232 CEACAMP11-201ENST00000455211 583 ntBASIC4.15□□□□□ -1.75
SSSCA1O60232 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.15□□□□□ -1.75
SSSCA1O60232 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
SSSCA1O60232 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.15□□□□□ -1.75
SSSCA1O60232 AC098818.1-201ENST00000478593 252 ntBASIC4.15□□□□□ -1.75
SSSCA1O60232 AC020779.1-201ENST00000478757 796 ntBASIC4.15□□□□□ -1.75
SSSCA1O60232 AC090686.1-201ENST00000481577 749 ntBASIC4.15□□□□□ -1.75
SSSCA1O60232 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.15□□□□□ -1.75
SSSCA1O60232 AC122718.2-201ENST00000505325 591 ntBASIC4.15□□□□□ -1.75
SSSCA1O60232 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.15□□□□□ -1.75
SSSCA1O60232 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.15□□□□□ -1.75
SSSCA1O60232 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.15□□□□□ -1.75
SSSCA1O60232 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC4.15□□□□□ -1.75
SSSCA1O60232 BTG1P1-201ENST00000540396 508 ntBASIC4.15□□□□□ -1.75
SSSCA1O60232 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.15□□□□□ -1.75
SSSCA1O60232 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.15□□□□□ -1.75
SSSCA1O60232 NDUFB4P11-201ENST00000560510 395 ntBASIC4.15□□□□□ -1.75
SSSCA1O60232 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.15□□□□□ -1.75
SSSCA1O60232 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.15□□□□□ -1.75
SSSCA1O60232 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SSSCA1O60232 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.15□□□□□ -1.75
SSSCA1O60232 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SSSCA1O60232 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.15□□□□□ -1.75
SSSCA1O60232 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.15□□□□□ -1.75
SSSCA1O60232 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SSSCA1O60232 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
SSSCA1O60232 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC4.15□□□□□ -1.75
SSSCA1O60232 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SSSCA1O60232 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SSSCA1O60232 SLC9B1P1-201ENST00000331172 1337 ntBASIC4.15□□□□□ -1.75
SSSCA1O60232 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SSSCA1O60232 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
SSSCA1O60232 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.14□□□□□ -1.75
SSSCA1O60232 CASC19-221ENST00000641309 1382 ntBASIC4.14□□□□□ -1.75
SSSCA1O60232 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSSCA1O60232 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SSSCA1O60232 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSSCA1O60232 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSSCA1O60232 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSSCA1O60232 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.14□□□□□ -1.75
SSSCA1O60232 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.14□□□□□ -1.75
SSSCA1O60232 RNU6-249P-201ENST00000363016 102 ntBASIC4.14□□□□□ -1.75
SSSCA1O60232 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSSCA1O60232 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.14□□□□□ -1.75
SSSCA1O60232 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.14□□□□□ -1.75
SSSCA1O60232 NFU1P1-201ENST00000413128 774 ntBASIC4.14□□□□□ -1.75
SSSCA1O60232 OR2AT2P-201ENST00000413438 905 ntBASIC4.14□□□□□ -1.75
SSSCA1O60232 AL662874.1-201ENST00000426065 230 ntBASIC4.14□□□□□ -1.75
SSSCA1O60232 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.14□□□□□ -1.75
SSSCA1O60232 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC4.14□□□□□ -1.75
SSSCA1O60232 FMO7P-201ENST00000436045 768 ntBASIC4.14□□□□□ -1.75
SSSCA1O60232 AC004980.3-201ENST00000447046 365 ntBASIC4.14□□□□□ -1.75
SSSCA1O60232 AC093166.3-201ENST00000448785 303 ntBASIC4.14□□□□□ -1.75
SSSCA1O60232 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC4.14□□□□□ -1.75
SSSCA1O60232 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC4.14□□□□□ -1.75
SSSCA1O60232 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC4.14□□□□□ -1.75
SSSCA1O60232 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.14□□□□□ -1.75
SSSCA1O60232 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.14□□□□□ -1.75
SSSCA1O60232 ENPP7P9-201ENST00000514456 627 ntBASIC4.14□□□□□ -1.75
SSSCA1O60232 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.14□□□□□ -1.75
SSSCA1O60232 RPL23AP53-201ENST00000521854 457 ntBASIC4.14□□□□□ -1.75
SSSCA1O60232 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.14□□□□□ -1.75
SSSCA1O60232 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.14□□□□□ -1.75
SSSCA1O60232 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC4.14□□□□□ -1.75
SSSCA1O60232 AC005868.1-201ENST00000536421 331 ntBASIC4.14□□□□□ -1.75
SSSCA1O60232 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC4.14□□□□□ -1.75
SSSCA1O60232 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.14□□□□□ -1.75
SSSCA1O60232 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.14□□□□□ -1.75
SSSCA1O60232 AL049830.4-201ENST00000555149 351 ntBASIC4.14□□□□□ -1.75
SSSCA1O60232 SETP1-201ENST00000556014 845 ntBASIC4.14□□□□□ -1.75
SSSCA1O60232 AL390334.1-201ENST00000556395 450 ntBASIC4.14□□□□□ -1.75
SSSCA1O60232 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC4.14□□□□□ -1.75
SSSCA1O60232 AL390726.5-202ENST00000564800 256 ntBASIC4.14□□□□□ -1.75
SSSCA1O60232 CYCSP40-201ENST00000575927 294 ntBASIC4.14□□□□□ -1.75
SSSCA1O60232 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.14□□□□□ -1.75
SSSCA1O60232 AC008115.3-201ENST00000614874 549 ntBASIC4.14□□□□□ -1.75
SSSCA1O60232 AC132068.1-201ENST00000623805 459 ntBASIC4.14□□□□□ -1.75
SSSCA1O60232 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.14□□□□□ -1.75
SSSCA1O60232 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSSCA1O60232 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSSCA1O60232 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.14□□□□□ -1.75
SSSCA1O60232 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSSCA1O60232 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.14□□□□□ -1.75
SSSCA1O60232 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSSCA1O60232 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.14□□□□□ -1.75
SSSCA1O60232 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.13□□□□□ -1.75
SSSCA1O60232 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SSSCA1O60232 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SSSCA1O60232 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
SSSCA1O60232 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SSSCA1O60232 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SSSCA1O60232 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC4.13□□□□□ -1.75
SSSCA1O60232 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
SSSCA1O60232 OR5AQ1P-203ENST00000641818 1529 ntBASIC4.13□□□□□ -1.75
SSSCA1O60232 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms