Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.15□□□□□ -1.59
SSX4O60224 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.15□□□□□ -1.59
SSX4O60224 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SSX4O60224 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SSX4O60224 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SSX4O60224 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
SSX4O60224 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SSX4O60224 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.15□□□□□ -1.59
SSX4O60224 AC020656.2-201ENST00000613291 5309 ntBASIC5.15□□□□□ -1.59
SSX4O60224 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.15□□□□□ -1.59
SSX4O60224 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
SSX4O60224 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
SSX4O60224 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SSX4O60224 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SSX4O60224 AC106872.5-201ENST00000508856 1416 ntBASIC5.14□□□□□ -1.59
SSX4O60224 RARSP1-201ENST00000542842 1418 ntBASIC5.14□□□□□ -1.59
SSX4O60224 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
SSX4O60224 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.14□□□□□ -1.59
SSX4O60224 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSX4O60224 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
SSX4O60224 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SSX4O60224 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSX4O60224 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.14□□□□□ -1.59
SSX4O60224 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.14□□□□□ -1.59
SSX4O60224 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SSX4O60224 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SSX4O60224 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SSX4O60224 RNU6-249P-201ENST00000363016 102 ntBASIC5.14□□□□□ -1.59
SSX4O60224 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
SSX4O60224 SNRPEP6-201ENST00000407465 277 ntBASIC5.14□□□□□ -1.59
SSX4O60224 RN7SKP286-201ENST00000410894 299 ntBASIC5.14□□□□□ -1.59
SSX4O60224 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.14□□□□□ -1.59
SSX4O60224 BX284632.2-201ENST00000421091 399 ntBASIC5.14□□□□□ -1.59
SSX4O60224 AC006065.1-201ENST00000422539 802 ntBASIC5.14□□□□□ -1.59
SSX4O60224 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.14□□□□□ -1.59
SSX4O60224 BX323845.3-201ENST00000428215 527 ntBASIC5.14□□□□□ -1.59
SSX4O60224 BX119321.1-201ENST00000428912 797 ntBASIC5.14□□□□□ -1.59
SSX4O60224 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.14□□□□□ -1.59
SSX4O60224 AL512605.1-202ENST00000441919 381 ntBASIC5.14□□□□□ -1.59
SSX4O60224 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSX4O60224 AL359955.2-201ENST00000445380 353 ntBASIC5.14□□□□□ -1.59
SSX4O60224 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SSX4O60224 AL445466.1-201ENST00000448432 357 ntBASIC5.14□□□□□ -1.59
SSX4O60224 AL445665.1-202ENST00000452436 324 ntBASIC5.14□□□□□ -1.59
SSX4O60224 RN7SL273P-201ENST00000481561 299 ntBASIC5.14□□□□□ -1.59
SSX4O60224 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.14□□□□□ -1.59
SSX4O60224 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.14□□□□□ -1.59
SSX4O60224 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
SSX4O60224 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.14□□□□□ -1.59
SSX4O60224 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.14□□□□□ -1.59
SSX4O60224 MIR4776-2-201ENST00000580204 80 ntBASIC5.14□□□□□ -1.59
SSX4O60224 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.14□□□□□ -1.59
SSX4O60224 AC006115.2-201ENST00000596823 202 ntBASIC5.14□□□□□ -1.59
SSX4O60224 COX6CP7-201ENST00000597056 208 ntBASIC5.14□□□□□ -1.59
SSX4O60224 SNX6P1-201ENST00000601728 1224 ntBASIC5.14□□□□□ -1.59
SSX4O60224 KATNBL1P5-201ENST00000605015 517 ntBASIC5.14□□□□□ -1.59
SSX4O60224 FAM72A-208ENST00000607379 1139 ntBASIC5.14□□□□□ -1.59
SSX4O60224 AL096803.3-201ENST00000609032 532 ntBASIC5.14□□□□□ -1.59
SSX4O60224 AC004477.3-201ENST00000614061 590 ntBASIC5.14□□□□□ -1.59
SSX4O60224 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSX4O60224 AC097372.4-201ENST00000625025 466 ntBASIC5.14□□□□□ -1.59
SSX4O60224 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.14□□□□□ -1.59
SSX4O60224 FRG1EP-201ENST00000634469 770 ntBASIC5.14□□□□□ -1.59
SSX4O60224 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.14□□□□□ -1.59
SSX4O60224 AL049767.1-202ENST00000637826 242 ntBASIC5.14□□□□□ -1.59
SSX4O60224 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SSX4O60224 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.14□□□□□ -1.59
SSX4O60224 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.14□□□□□ -1.59
SSX4O60224 MFSD8-219ENST00000641228 2559 ntBASIC5.14□□□□□ -1.59
SSX4O60224 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.14□□□□□ -1.59
SSX4O60224 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSX4O60224 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.14□□□□□ -1.59
SSX4O60224 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SSX4O60224 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSX4O60224 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.13□□□□□ -1.59
SSX4O60224 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SSX4O60224 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SSX4O60224 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SSX4O60224 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SSX4O60224 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.13□□□□□ -1.59
SSX4O60224 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.13□□□□□ -1.59
SSX4O60224 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SSX4O60224 AL034403.1-201ENST00000399414 885 ntBASIC5.13□□□□□ -1.59
SSX4O60224 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.13□□□□□ -1.59
SSX4O60224 AL353692.2-201ENST00000407054 335 ntBASIC5.13□□□□□ -1.59
SSX4O60224 RN7SKP279-201ENST00000411383 298 ntBASIC5.13□□□□□ -1.59
SSX4O60224 Z68694.1-201ENST00000413929 841 ntBASIC5.13□□□□□ -1.59
SSX4O60224 AL513325.1-201ENST00000417716 1034 ntBASIC5.13□□□□□ -1.59
SSX4O60224 MTND4LP13-201ENST00000425022 298 ntBASIC5.13□□□□□ -1.59
SSX4O60224 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.13□□□□□ -1.59
SSX4O60224 MTCYBP29-201ENST00000436327 1006 ntBASIC5.13□□□□□ -1.59
SSX4O60224 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC5.13□□□□□ -1.59
SSX4O60224 VN1R110P-201ENST00000438988 971 ntBASIC5.13□□□□□ -1.59
SSX4O60224 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SSX4O60224 ZNF736P1Y-201ENST00000440402 1276 ntBASIC5.13□□□□□ -1.59
SSX4O60224 ARAFP2-201ENST00000440565 559 ntBASIC5.13□□□□□ -1.59
SSX4O60224 AC064862.4-201ENST00000442180 334 ntBASIC5.13□□□□□ -1.59
SSX4O60224 AL353898.1-201ENST00000444055 238 ntBASIC5.13□□□□□ -1.59
SSX4O60224 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.13□□□□□ -1.59
SSX4O60224 AC110749.1-201ENST00000462007 357 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms