Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 MGAT2P2-201ENST00000427194 797 ntBASIC5.18□□□□□ -1.58
SLC28A1O00337 AC115283.1-201ENST00000427353 400 ntBASIC5.18□□□□□ -1.58
SLC28A1O00337 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.18□□□□□ -1.58
SLC28A1O00337 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SLC28A1O00337 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SLC28A1O00337 RN7SL72P-201ENST00000460697 269 ntBASIC5.18□□□□□ -1.58
SLC28A1O00337 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.18□□□□□ -1.58
SLC28A1O00337 RPL37P23-201ENST00000492641 294 ntBASIC5.18□□□□□ -1.58
SLC28A1O00337 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SLC28A1O00337 HMGB1P44-201ENST00000508597 572 ntBASIC5.18□□□□□ -1.58
SLC28A1O00337 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.18□□□□□ -1.58
SLC28A1O00337 SNORA70.17-201ENST00000516449 133 ntBASIC5.18□□□□□ -1.58
SLC28A1O00337 SEC11B-201ENST00000518383 499 ntBASIC5.18□□□□□ -1.58
SLC28A1O00337 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.18□□□□□ -1.58
SLC28A1O00337 AC027369.5-201ENST00000533838 755 ntBASIC5.18□□□□□ -1.58
SLC28A1O00337 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.18□□□□□ -1.58
SLC28A1O00337 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.18□□□□□ -1.58
SLC28A1O00337 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.18□□□□□ -1.58
SLC28A1O00337 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.18□□□□□ -1.58
SLC28A1O00337 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SLC28A1O00337 AL592494.3-201ENST00000609485 464 ntBASIC5.18□□□□□ -1.58
SLC28A1O00337 AL096712.1-201ENST00000614561 159 ntBASIC5.18□□□□□ -1.58
SLC28A1O00337 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SLC28A1O00337 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.18□□□□□ -1.58
SLC28A1O00337 AC087565.3-202ENST00000642085 1603 ntBASIC5.18□□□□□ -1.58
SLC28A1O00337 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SLC28A1O00337 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SLC28A1O00337 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SLC28A1O00337 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SLC28A1O00337 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
SLC28A1O00337 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SLC28A1O00337 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
SLC28A1O00337 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SLC28A1O00337 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
SLC28A1O00337 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
SLC28A1O00337 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.17□□□□□ -1.58
SLC28A1O00337 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SLC28A1O00337 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SLC28A1O00337 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SLC28A1O00337 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SLC28A1O00337 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SLC28A1O00337 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
SLC28A1O00337 RNU6-618P-201ENST00000363518 112 ntBASIC5.17□□□□□ -1.58
SLC28A1O00337 RNU6-670P-201ENST00000364312 104 ntBASIC5.17□□□□□ -1.58
SLC28A1O00337 AC007618.1-201ENST00000366455 732 ntBASIC5.17□□□□□ -1.58
SLC28A1O00337 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.17□□□□□ -1.58
SLC28A1O00337 GAPDHP15-201ENST00000398586 975 ntBASIC5.17□□□□□ -1.58
SLC28A1O00337 OR7E156P-201ENST00000400303 464 ntBASIC5.17□□□□□ -1.58
SLC28A1O00337 AL607077.1-201ENST00000401718 499 ntBASIC5.17□□□□□ -1.58
SLC28A1O00337 VN1R12P-201ENST00000403778 876 ntBASIC5.17□□□□□ -1.58
SLC28A1O00337 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.17□□□□□ -1.58
SLC28A1O00337 RNU6-564P-201ENST00000410983 104 ntBASIC5.17□□□□□ -1.58
SLC28A1O00337 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.17□□□□□ -1.58
SLC28A1O00337 HMGN1P20-201ENST00000411849 300 ntBASIC5.17□□□□□ -1.58
SLC28A1O00337 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.17□□□□□ -1.58
SLC28A1O00337 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SLC28A1O00337 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.17□□□□□ -1.58
SLC28A1O00337 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.17□□□□□ -1.58
SLC28A1O00337 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.17□□□□□ -1.58
SLC28A1O00337 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.17□□□□□ -1.58
SLC28A1O00337 DNAJA1P5-201ENST00000440278 943 ntBASIC5.17□□□□□ -1.58
SLC28A1O00337 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.17□□□□□ -1.58
SLC28A1O00337 PRPF38AP1-201ENST00000451976 933 ntBASIC5.17□□□□□ -1.58
SLC28A1O00337 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SLC28A1O00337 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.17□□□□□ -1.58
SLC28A1O00337 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.17□□□□□ -1.58
SLC28A1O00337 UGT2A3P7-201ENST00000510485 734 ntBASIC5.17□□□□□ -1.58
SLC28A1O00337 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.17□□□□□ -1.58
SLC28A1O00337 AC024405.1-201ENST00000532521 1042 ntBASIC5.17□□□□□ -1.58
SLC28A1O00337 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SLC28A1O00337 AC106730.2-201ENST00000566641 540 ntBASIC5.17□□□□□ -1.58
SLC28A1O00337 AC005341.1-201ENST00000571086 708 ntBASIC5.17□□□□□ -1.58
SLC28A1O00337 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.17□□□□□ -1.58
SLC28A1O00337 SNORD39.2-201ENST00000579995 76 ntBASIC5.17□□□□□ -1.58
SLC28A1O00337 AC127024.5-201ENST00000580085 462 ntBASIC5.17□□□□□ -1.58
SLC28A1O00337 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.17□□□□□ -1.58
SLC28A1O00337 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.17□□□□□ -1.58
SLC28A1O00337 PRPF19P1-201ENST00000584766 898 ntBASIC5.17□□□□□ -1.58
SLC28A1O00337 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.17□□□□□ -1.58
SLC28A1O00337 AC132068.1-201ENST00000623805 459 ntBASIC5.17□□□□□ -1.58
SLC28A1O00337 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.17□□□□□ -1.58
SLC28A1O00337 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.17□□□□□ -1.58
SLC28A1O00337 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.17□□□□□ -1.58
SLC28A1O00337 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SLC28A1O00337 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.17□□□□□ -1.58
SLC28A1O00337 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SLC28A1O00337 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SLC28A1O00337 TRIM51GP-201ENST00000534741 1350 ntBASIC5.16□□□□□ -1.58
SLC28A1O00337 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SLC28A1O00337 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
SLC28A1O00337 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
SLC28A1O00337 AC093849.1-201ENST00000563631 2209 ntBASIC5.16□□□□□ -1.58
SLC28A1O00337 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.16□□□□□ -1.58
SLC28A1O00337 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.16□□□□□ -1.58
SLC28A1O00337 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
SLC28A1O00337 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SLC28A1O00337 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
SLC28A1O00337 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
SLC28A1O00337 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SLC28A1O00337 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 145.9 ms