Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC092747.4-201ENST00000620519 1861 ntBASIC5.16□□□□□ -1.58
TRIM49D1C9J1S8 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM49D1C9J1S8 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM49D1C9J1S8 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.16□□□□□ -1.58
TRIM49D1C9J1S8 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM49D1C9J1S8 AC023490.2-201ENST00000359859 470 ntBASIC5.16□□□□□ -1.58
TRIM49D1C9J1S8 RNA5SP319-201ENST00000362768 119 ntBASIC5.16□□□□□ -1.58
TRIM49D1C9J1S8 RN7SKP292-201ENST00000365522 317 ntBASIC5.16□□□□□ -1.58
TRIM49D1C9J1S8 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM49D1C9J1S8 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM49D1C9J1S8 DPPA2P2-201ENST00000418220 897 ntBASIC5.16□□□□□ -1.58
TRIM49D1C9J1S8 OR2AH1P-201ENST00000425717 928 ntBASIC5.16□□□□□ -1.58
TRIM49D1C9J1S8 AL139148.1-201ENST00000427122 680 ntBASIC5.16□□□□□ -1.58
TRIM49D1C9J1S8 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM49D1C9J1S8 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM49D1C9J1S8 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.16□□□□□ -1.58
TRIM49D1C9J1S8 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM49D1C9J1S8 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM49D1C9J1S8 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM49D1C9J1S8 MIR1273E-201ENST00000581165 102 ntBASIC5.16□□□□□ -1.58
TRIM49D1C9J1S8 AC027243.2-201ENST00000602530 724 ntBASIC5.16□□□□□ -1.58
TRIM49D1C9J1S8 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM49D1C9J1S8 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM49D1C9J1S8 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
TRIM49D1C9J1S8 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM49D1C9J1S8 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM49D1C9J1S8 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
TRIM49D1C9J1S8 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
TRIM49D1C9J1S8 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM49D1C9J1S8 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
TRIM49D1C9J1S8 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM49D1C9J1S8 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM49D1C9J1S8 AC011447.7-201ENST00000624228 1590 ntBASIC5.16□□□□□ -1.58
TRIM49D1C9J1S8 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM49D1C9J1S8 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM49D1C9J1S8 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.15□□□□□ -1.58
TRIM49D1C9J1S8 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
TRIM49D1C9J1S8 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.15□□□□□ -1.58
TRIM49D1C9J1S8 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.15□□□□□ -1.58
TRIM49D1C9J1S8 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.15□□□□□ -1.58
TRIM49D1C9J1S8 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TRIM49D1C9J1S8 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
TRIM49D1C9J1S8 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM49D1C9J1S8 REREP1Y-201ENST00000422655 198 ntBASIC5.15□□□□□ -1.59
TRIM49D1C9J1S8 REREP2Y-201ENST00000439103 200 ntBASIC5.15□□□□□ -1.59
TRIM49D1C9J1S8 RPL12P11-201ENST00000439970 501 ntBASIC5.15□□□□□ -1.59
TRIM49D1C9J1S8 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM49D1C9J1S8 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM49D1C9J1S8 AL356981.1-201ENST00000454879 684 ntBASIC5.15□□□□□ -1.59
TRIM49D1C9J1S8 AC091180.1-201ENST00000462104 372 ntBASIC5.15□□□□□ -1.59
TRIM49D1C9J1S8 HMGB3P16-201ENST00000508037 287 ntBASIC5.15□□□□□ -1.59
TRIM49D1C9J1S8 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM49D1C9J1S8 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM49D1C9J1S8 AC068993.1-201ENST00000546724 589 ntBASIC5.15□□□□□ -1.59
TRIM49D1C9J1S8 BNIP3P1-201ENST00000547295 580 ntBASIC5.15□□□□□ -1.59
TRIM49D1C9J1S8 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.15□□□□□ -1.59
TRIM49D1C9J1S8 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM49D1C9J1S8 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM49D1C9J1S8 RPL10P14-201ENST00000565265 298 ntBASIC5.15□□□□□ -1.59
TRIM49D1C9J1S8 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM49D1C9J1S8 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.15□□□□□ -1.59
TRIM49D1C9J1S8 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.15□□□□□ -1.59
TRIM49D1C9J1S8 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.15□□□□□ -1.59
TRIM49D1C9J1S8 AC100767.2-201ENST00000604840 693 ntBASIC5.15□□□□□ -1.59
TRIM49D1C9J1S8 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.59
TRIM49D1C9J1S8 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM49D1C9J1S8 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM49D1C9J1S8 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM49D1C9J1S8 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
TRIM49D1C9J1S8 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM49D1C9J1S8 AC005261.2-201ENST00000593427 4258 ntBASIC5.15□□□□□ -1.59
TRIM49D1C9J1S8 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM49D1C9J1S8 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM49D1C9J1S8 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.15□□□□□ -1.59
TRIM49D1C9J1S8 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 RPS3P2-201ENST00000421346 701 ntBASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 COX6CP13-201ENST00000428703 226 ntBASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 RPS29P10-201ENST00000439197 166 ntBASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 AC094085.1-201ENST00000468914 584 ntBASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 AC020779.1-201ENST00000478757 796 ntBASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 AC074087.1-201ENST00000512059 724 ntBASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms