Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC005294.1-201ENST00000355509 281 ntBASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 GNG5P5-201ENST00000420444 220 ntBASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AURKAPS1-201ENST00000451805 1212 ntBASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 UBA52P7-201ENST00000486088 380 ntBASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 IGBP1P4-201ENST00000503202 879 ntBASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 SCARNA20.4-201ENST00000516969 131 ntBASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC060766.1-201ENST00000590824 627 ntBASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC016769.4-201ENST00000616893 535 ntBASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC104623.2-202ENST00000623477 4002 ntBASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
TCRBV4S1A1TA0A5B7 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC003973.3-201ENST00000624863 2822 ntBASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AL390774.1-201ENST00000411924 246 ntBASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 GABARAPL3-201ENST00000412799 354 ntBASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AL139148.1-201ENST00000427122 680 ntBASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC090018.1-201ENST00000434369 367 ntBASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC090804.1-201ENST00000448870 490 ntBASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 RN7SL515P-201ENST00000463999 297 ntBASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC079841.1-201ENST00000481228 950 ntBASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 RPS21P4-201ENST00000487122 248 ntBASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 RPL15P21-201ENST00000495592 567 ntBASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 RPS24P16-201ENST00000497294 392 ntBASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC016559.2-201ENST00000510759 359 ntBASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 MTND6P2-201ENST00000512226 524 ntBASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC092709.1-201ENST00000521355 1045 ntBASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 HMGB1P40-201ENST00000525121 540 ntBASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 BLZF2P-201ENST00000553776 1130 ntBASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC106730.2-201ENST00000566641 540 ntBASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 MTCYBP13-201ENST00000578634 1093 ntBASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AP005403.1-201ENST00000579720 229 ntBASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC127024.5-201ENST00000580085 462 ntBASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC037198.3-201ENST00000616754 526 ntBASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
TCRBV4S1A1TA0A5B7 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
TCRBV4S1A1TA0A5B7 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms