Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LMO3Q8TAP4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.03■□□□□ 0.96
LMO3Q8TAP4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.03■□□□□ 0.96
LMO3Q8TAP4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LMO3Q8TAP4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.03■□□□□ 0.96
LMO3Q8TAP4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LMO3Q8TAP4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LMO3Q8TAP4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LMO3Q8TAP4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LMO3Q8TAP4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.03■□□□□ 0.96
LMO3Q8TAP4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
LMO3Q8TAP4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LMO3Q8TAP4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LMO3Q8TAP4 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LMO3Q8TAP4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
LMO3Q8TAP4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
LMO3Q8TAP4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LMO3Q8TAP4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.02■□□□□ 0.96
LMO3Q8TAP4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LMO3Q8TAP4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
LMO3Q8TAP4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LMO3Q8TAP4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LMO3Q8TAP4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LMO3Q8TAP4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.02■□□□□ 0.96
LMO3Q8TAP4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
LMO3Q8TAP4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
LMO3Q8TAP4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LMO3Q8TAP4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LMO3Q8TAP4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LMO3Q8TAP4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.02■□□□□ 0.96
LMO3Q8TAP4 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.02■□□□□ 0.96
LMO3Q8TAP4 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.02■□□□□ 0.96
LMO3Q8TAP4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.02■□□□□ 0.96
LMO3Q8TAP4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.02■□□□□ 0.96
LMO3Q8TAP4 AC069544.1-201ENST00000609399 999 ntBASIC21.02■□□□□ 0.96
LMO3Q8TAP4 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LMO3Q8TAP4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.02■□□□□ 0.96
LMO3Q8TAP4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
LMO3Q8TAP4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
LMO3Q8TAP4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.02■□□□□ 0.95
LMO3Q8TAP4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LMO3Q8TAP4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.01■□□□□ 0.95
LMO3Q8TAP4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.01■□□□□ 0.95
LMO3Q8TAP4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LMO3Q8TAP4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.01■□□□□ 0.95
LMO3Q8TAP4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
LMO3Q8TAP4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.01■□□□□ 0.95
LMO3Q8TAP4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.01■□□□□ 0.95
LMO3Q8TAP4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.01■□□□□ 0.95
LMO3Q8TAP4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.01■□□□□ 0.95
LMO3Q8TAP4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.01■□□□□ 0.95
LMO3Q8TAP4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.01■□□□□ 0.95
LMO3Q8TAP4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.01■□□□□ 0.95
LMO3Q8TAP4 KRT8P8-201ENST00000434750 1448 ntBASIC21.01■□□□□ 0.95
LMO3Q8TAP4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
LMO3Q8TAP4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LMO3Q8TAP4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.01■□□□□ 0.95
LMO3Q8TAP4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
LMO3Q8TAP4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LMO3Q8TAP4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
LMO3Q8TAP4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.01■□□□□ 0.95
LMO3Q8TAP4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21■□□□□ 0.95
LMO3Q8TAP4 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LMO3Q8TAP4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21■□□□□ 0.95
LMO3Q8TAP4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
LMO3Q8TAP4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
LMO3Q8TAP4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
LMO3Q8TAP4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LMO3Q8TAP4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21■□□□□ 0.95
LMO3Q8TAP4 ESRRAP1-201ENST00000400596 1257 ntBASIC21■□□□□ 0.95
LMO3Q8TAP4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21■□□□□ 0.95
LMO3Q8TAP4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21■□□□□ 0.95
LMO3Q8TAP4 ADM-205ENST00000528544 586 ntTSL 2 BASIC21■□□□□ 0.95
LMO3Q8TAP4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
LMO3Q8TAP4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21■□□□□ 0.95
LMO3Q8TAP4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21■□□□□ 0.95
LMO3Q8TAP4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LMO3Q8TAP4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LMO3Q8TAP4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LMO3Q8TAP4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21■□□□□ 0.95
LMO3Q8TAP4 ZNF815P-204ENST00000434898 1737 ntBASIC21■□□□□ 0.95
LMO3Q8TAP4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21■□□□□ 0.95
LMO3Q8TAP4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
LMO3Q8TAP4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21■□□□□ 0.95
LMO3Q8TAP4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LMO3Q8TAP4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LMO3Q8TAP4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LMO3Q8TAP4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
LMO3Q8TAP4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LMO3Q8TAP4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LMO3Q8TAP4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.99■□□□□ 0.95
LMO3Q8TAP4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.99■□□□□ 0.95
LMO3Q8TAP4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.99■□□□□ 0.95
LMO3Q8TAP4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
LMO3Q8TAP4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.99■□□□□ 0.95
LMO3Q8TAP4 MIR4651-201ENST00000582622 73 ntBASIC20.99■□□□□ 0.95
LMO3Q8TAP4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.99■□□□□ 0.95
LMO3Q8TAP4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LMO3Q8TAP4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.99■□□□□ 0.95
LMO3Q8TAP4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms