Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Samm50Q8BGH2 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Samm50Q8BGH2 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Samm50Q8BGH2 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Samm50Q8BGH2 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Samm50Q8BGH2 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
Samm50Q8BGH2 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Samm50Q8BGH2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Samm50Q8BGH2 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Samm50Q8BGH2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Samm50Q8BGH2 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Samm50Q8BGH2 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Samm50Q8BGH2 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Samm50Q8BGH2 Gm12085-201ENSMUST00000119263 940 ntBASIC19.71■□□□□ 0.75
Samm50Q8BGH2 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Samm50Q8BGH2 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.71■□□□□ 0.75
Samm50Q8BGH2 Odf3b-204ENSMUST00000227834 930 ntBASIC19.71■□□□□ 0.75
Samm50Q8BGH2 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Samm50Q8BGH2 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Samm50Q8BGH2 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Samm50Q8BGH2 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Samm50Q8BGH2 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Samm50Q8BGH2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Samm50Q8BGH2 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Samm50Q8BGH2 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Samm50Q8BGH2 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Samm50Q8BGH2 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Samm50Q8BGH2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Samm50Q8BGH2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.7■□□□□ 0.74
Samm50Q8BGH2 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.7■□□□□ 0.74
Samm50Q8BGH2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.7■□□□□ 0.74
Samm50Q8BGH2 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.7■□□□□ 0.74
Samm50Q8BGH2 Gm21814-202ENSMUST00000203277 873 ntBASIC19.7■□□□□ 0.74
Samm50Q8BGH2 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Samm50Q8BGH2 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Samm50Q8BGH2 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.7■□□□□ 0.74
Samm50Q8BGH2 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Samm50Q8BGH2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Samm50Q8BGH2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Samm50Q8BGH2 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Samm50Q8BGH2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Samm50Q8BGH2 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Samm50Q8BGH2 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Samm50Q8BGH2 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Samm50Q8BGH2 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Samm50Q8BGH2 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Samm50Q8BGH2 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Samm50Q8BGH2 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Samm50Q8BGH2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Samm50Q8BGH2 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.69■□□□□ 0.74
Samm50Q8BGH2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.69■□□□□ 0.74
Samm50Q8BGH2 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Samm50Q8BGH2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Samm50Q8BGH2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Samm50Q8BGH2 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.69■□□□□ 0.74
Samm50Q8BGH2 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Samm50Q8BGH2 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Samm50Q8BGH2 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Samm50Q8BGH2 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Samm50Q8BGH2 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Samm50Q8BGH2 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Samm50Q8BGH2 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.69■□□□□ 0.74
Samm50Q8BGH2 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Samm50Q8BGH2 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Samm50Q8BGH2 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Samm50Q8BGH2 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Samm50Q8BGH2 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Samm50Q8BGH2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Samm50Q8BGH2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Samm50Q8BGH2 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Samm50Q8BGH2 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Samm50Q8BGH2 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Samm50Q8BGH2 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.68■□□□□ 0.74
Samm50Q8BGH2 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Samm50Q8BGH2 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Samm50Q8BGH2 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.68■□□□□ 0.74
Samm50Q8BGH2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.68■□□□□ 0.74
Samm50Q8BGH2 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.68■□□□□ 0.74
Samm50Q8BGH2 Gm30025-201ENSMUST00000218555 728 ntBASIC19.68■□□□□ 0.74
Samm50Q8BGH2 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Samm50Q8BGH2 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Samm50Q8BGH2 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Samm50Q8BGH2 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Samm50Q8BGH2 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Samm50Q8BGH2 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Samm50Q8BGH2 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Samm50Q8BGH2 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Samm50Q8BGH2 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.68■□□□□ 0.74
Samm50Q8BGH2 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Samm50Q8BGH2 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Samm50Q8BGH2 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Samm50Q8BGH2 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Samm50Q8BGH2 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.67■□□□□ 0.74
Samm50Q8BGH2 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Samm50Q8BGH2 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Samm50Q8BGH2 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC19.67■□□□□ 0.74
Samm50Q8BGH2 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Samm50Q8BGH2 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Samm50Q8BGH2 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.67■□□□□ 0.74
Samm50Q8BGH2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms