Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.07■□□□□ 0.96
RNF40O75150 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF40O75150 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.07■□□□□ 0.96
RNF40O75150 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF40O75150 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF40O75150 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF40O75150 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF40O75150 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF40O75150 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF40O75150 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF40O75150 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF40O75150 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF40O75150 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
RNF40O75150 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF40O75150 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.06■□□□□ 0.96
RNF40O75150 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF40O75150 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RNF40O75150 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.06■□□□□ 0.96
RNF40O75150 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF40O75150 AC007322.3-201ENST00000426526 701 ntBASIC21.06■□□□□ 0.96
RNF40O75150 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.06■□□□□ 0.96
RNF40O75150 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.06■□□□□ 0.96
RNF40O75150 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF40O75150 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF40O75150 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.06■□□□□ 0.96
RNF40O75150 FAM197Y4-202ENST00000622692 608 ntBASIC21.06■□□□□ 0.96
RNF40O75150 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RNF40O75150 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF40O75150 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.06■□□□□ 0.96
RNF40O75150 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF40O75150 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
RNF40O75150 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF40O75150 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF40O75150 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF40O75150 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF40O75150 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF40O75150 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RNF40O75150 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF40O75150 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF40O75150 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF40O75150 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF40O75150 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF40O75150 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF40O75150 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RNF40O75150 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF40O75150 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF40O75150 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
RNF40O75150 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF40O75150 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF40O75150 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF40O75150 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.05■□□□□ 0.96
RNF40O75150 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF40O75150 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.05■□□□□ 0.96
RNF40O75150 RPPH1-201ENST00000516869 333 ntBASIC21.05■□□□□ 0.96
RNF40O75150 C1QBPP2-201ENST00000528754 825 ntBASIC21.05■□□□□ 0.96
RNF40O75150 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.05■□□□□ 0.96
RNF40O75150 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF40O75150 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF40O75150 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF40O75150 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF40O75150 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RNF40O75150 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF40O75150 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF40O75150 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF40O75150 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF40O75150 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF40O75150 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF40O75150 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF40O75150 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21.04■□□□□ 0.96
RNF40O75150 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF40O75150 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF40O75150 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF40O75150 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF40O75150 KRT17P3-201ENST00000420566 1262 ntBASIC21.04■□□□□ 0.96
RNF40O75150 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.04■□□□□ 0.96
RNF40O75150 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.04■□□□□ 0.96
RNF40O75150 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF40O75150 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF40O75150 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF40O75150 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF40O75150 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF40O75150 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF40O75150 AC005082.1-201ENST00000413042 2259 ntBASIC21.04■□□□□ 0.96
RNF40O75150 AC093503.3-201ENST00000624917 2352 ntBASIC21.04■□□□□ 0.96
RNF40O75150 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF40O75150 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.04■□□□□ 0.96
RNF40O75150 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF40O75150 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF40O75150 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF40O75150 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
RNF40O75150 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF40O75150 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF40O75150 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF40O75150 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF40O75150 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF40O75150 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RNF40O75150 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF40O75150 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF40O75150 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.03■□□□□ 0.96
RNF40O75150 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms